Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03315 ATGGCTGTCACAGGTTCTGGTTCCGGGCAGCCGCAATTCATTTCGAGCACTGGCAACCGAAGCTTTTCCAATGCGCCACTCATTGAGAACTCAGATACTAATCAAATTGTTGTGCCTGATAGGAAAAGCTGGAAAAATTTATTTGCATACATGGGGCCTGGGTTTCTTGTTTCCATTGCATATATAGATCCAGGAAACTTCGAGACGGATCTTCAGTCTGGGGCACAATATAAATATGAGTTACTTTGGATCATATTGTTGGCTTCATGTGTTGCTCTTGTAATTCAATCAATGGCAGCTAATCTCGGGGTGGTCACTGGAAAACACTTAGCAGAGCACTGTAGAGCTGAATATCCCCGGGTGCCCAACTTCATCCTTTGGATTATTGCTGAAATTGCCATAGTGGCCTGTGACATTCCTGAAGTAATTGGGACAGCCTTTGCATTGAACATGCTCTTCAACATACCTGTTTGGATTGGTGTTCTTCTGACAGGACTCAGCACATTGATGCTCTTAGCATTGCAGCAATATGGGGTAGTTAGGAAACTCGAATTCTTGATTGCATTTTTAGTATTTACAATTGCTGCATGTTTTATGGTTGAGCTTGGATATGCAAAGCCTGATGCTAAAGAAGTTCTGAAGGGTCTTTTTGAGCCAGAACTAAAAGGGAGTGGTGCTACTGGTCTTGCAATTTCTCTTCTTGGAGCTATGGTTATGCCGCACAATCTCTTCCTGCATTCAGCACTGGTGCTTTCTAGGAAAATACCACGATCAGTTCAGGGAATCAGAGAGGCTTGCAGATTTTACATGATAGAAAGTGCTTTTGCTCTCATGGTGGCCTTCCTCATAAATGTTTGTGTTATTTCTGTAAGTGGTGCTGTTTGCAATTCTTCAAATTTGAATGCTGAAGATCAGATGAGCTGTCAGGATTTGGATCTGAACAAAGCCTCCTTCCTACTTAGAAATGTCTTGGGGAAATGGAGTTCAAAGCTGTTTGGAATTGCTTTGTTTGCATCGGGTCAAAGTTCTACTATTACAGGAACCTATGCAGGACAGTATGTCATGCAGGGATTTCTGGATTTACGACTGGAGCCATGGATTCGGAATATGTTAACTCGTTGTTTAGCCATAGTCCCTAGTTTGATTGTTGCAGTCATTGGTGGTTCTGCTGGGGCTGGGAAGCTCATAATAGTTGCATCTatgatcttatcatttgagcttccttttgctttggttccactcctcaagtttacaagcagcaaaACCAAAATGGGGACACATGTCAACTCTACAATGATTTCGGCTGTTACTTGGATAATCGGATTTTCGGGCATGGCAATGTATTTGGCTGGTATAACATATCTAGTACTTCGCAAAAATAAAGAGGCTACACACCTTTTGGCTCTAACAGCAACAGAAAATCAGCAGATGACAAATGAACAAGGCAATGGTTCAATCTATTCTCTTCCAAGAGAAGACATAGTAAGCATGCAATTGCCTCAAAGAAGTACTCCTGCAGATGTTGACTGA 1530 0.4052 MAVTGSGSGQPQFISSTGNRSFSNAPLIENSDTNQIVVPDRKSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILLASCVALVIQSMAANLGVVTGKHLAEHCRAEYPRVPNFILWIIAEIAIVACDIPEVIGTAFALNMLFNIPVWIGVLLTGLSTLMLLALQQYGVVRKLEFLIAFLVFTIAACFMVELGYAKPDAKEVLKGLFEPELKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVQGIREACRFYMIESAFALMVAFLINVCVISVSGAVCNSSNLNAEDQMSCQDLDLNKASFLLRNVLGKWSSKLFGIALFASGQSSTITGTYAGQYVMQGFLDLRLEPWIRNMLTRCLAIVPSLIVAVIGGSAGAGKLIIVASMILSFELPFALVPLLKFTSSKTKMGTHVNSTMISAVTWIIGFSGMAMYLAGITYLVLRKNKEATHLLALTATENQQMTNEQGNGSIYSLPREDIVSMQLPQRSTPADVD 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03315 509 PRINTS Natural resistance-associated macrophage protein signature 340 359 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma13g03315 509 PRINTS Natural resistance-associated macrophage protein signature 368 385 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma13g03315 509 PRINTS Natural resistance-associated macrophage protein signature 400 419 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma13g03315 509 PRINTS Natural resistance-associated macrophage protein signature 154 173 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma13g03315 509 PRINTS Natural resistance-associated macrophage protein signature 230 253 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma13g03315 509 PRINTS Natural resistance-associated macrophage protein signature 126 152 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma13g03315 509 PRINTS Natural resistance-associated macrophage protein signature 180 201 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma13g03315 509 PANTHER METAL TRANSPORTER NRAMP1 10 442 - -
Gma13g03315 509 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 46 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma13g03315 509 Pfam Natural resistance-associated macrophage protein 67 430 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma13g03315 509 Hamap Divalent metal cation transporter MntH [mntH]. 39 456 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma13g03315 509 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 10 442 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma13g03315 509 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 444 509 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma13g03315 509 PANTHER METAL TRANSPORTER NRAMP1 444 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03315 Gma-Chr13 47096974 47103216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03315 15 502 Inorganic Solute Cotransporters AT1G15960 75.665 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03315 K21398 - gmx:100797298 948.347