Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03312 ATGAAGAATACACCCAGGATAGGAAAAGGGAGAACTCAGGGATATATATGGACAACAACGAGGAAATACCCTCAACACCTACTTTTTGGTGGCTTCATTAATAATAATAATAGGAATTGCAAGAAGTCCCTCCTGAAGAGTTGTAGGTGTTTCAGTGTGGAGGAATGGAGCTTAGAAGATGGAGGTTTACCGGCGGTGTCATGCTCATTGGCACTGCCACCTCCTCCACCAGGGGTCCCTCTTGCAAGAAAGGTTGGAGCTGAGTTCATAGGGACCTTCATTCTCATGTTCACAGGCACTGCCGCTGCCATTGTCAACCAAAAGACAAATGGCTCTGAGACCCTTATTGGATGTGCTGCCACCACTGGCCTCGCCGTCATGATTGTCATCTTTCGCCACCGGCCACATCTCCGCTGCTCATCTCAACCCTGCTATCACCATTCCCTTAGCTGCATTAAAGCACTTCCCTTGGAAGCATGTGCCCATGTATATTGGTGCACAAGTTTTGGCATCTAA 516 0.4806 MKNTPRIGKGRTQGYIWTTTRKYPQHLLFGGFINNNNRNCKKSLLKSCRCFSVEEWSLEDGGLPAVSCSLALPPPPPGVPLARKVGAEFIGTFILMFTGTAAAIVNQKTNGSETLIGCAATTGLAVMIVIFRHRPHLRCSSQPCYHHSLSCIKALPLEACAHVYWCTSFGI 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03312 171 PANTHER BNAA02G36290D PROTEIN 18 158 - -
Gma13g03312 171 PANTHER AQUAPORIN NIP2-1 18 158 IPR034294 -
Gma13g03312 171 Gene3D Glycerol uptake facilitator protein. 79 158 IPR023271 -
Gma13g03312 171 SUPERFAMILY Aquaporin-like 80 160 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03312 Gma-Chr13 47077681 47078838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03312 19 131 Major Intrinsic Protein MIP AT1G80760 64.407 2.49e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03312 K09874 - gmx:100815637 165.236