Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03299 ATGCAGACTGGGAGGCTGCAGCAAACCCTAGCGGATTGCGTGGAGCGGCAAGGCAAGGCGTTGCATTCGGGAAAGGTTTCGACGGTGAGACTGTGTCCCGAACGCGCTTCCCGAGGCAGGCGGGTTCCGAATTCGAATGTGGAAGAAGTTGGTTTGACGGTGGCCACTGATCTTGATGGCAAAAGTGTTGAGAAAATGGCACCACATGTGAATGAACCAGTGTATGCTTGGAGAAATGATTCTTTTGTTGCTGCATTTCCTTCCGAAGTGGTTCGAATAACTTATGGCATTAACTTTTCGCAGGCACCTGTTATTGGCTGCTAG 324 0.5062 MQTGRLQQTLADCVERQGKALHSGKVSTVRLCPERASRGRRVPNSNVEEVGLTVATDLDGKSVEKMAPHVNEPVYAWRNDSFVAAFPSEVVRITYGINFSQAPVIGC 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03299 107 SUPERFAMILY Ribosomal protein S5 domain 2-like 6 48 IPR020568 -
Gma13g03299 107 Gene3D lpxc deacetylase, domain 1 5 72 IPR015870 GO:0008759|GO:0009245
Gma13g03299 107 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 46 107 IPR004463 GO:0008759|GO:0009245
Gma13g03299 107 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 2 40 IPR004463 GO:0008759|GO:0009245
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03299 Gma-Chr13 46951466 46953007 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03299 3 40 Carbohydrate Esterase AT1G24793 68.421 4.57e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03299 K02535 - gmx:100814465 127.102