Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03273 ATGCACTTAAGCAGCTACAAAGTGGTTTGGACTGCCAACAGAGGCTTACTCGTTGGGACTTCTGATAAATTTGTGCTTGACCATGATGGGAATGCATATTTGGAAGGTGGGAATGGTGTAGTTTGGGCAACAAATACAAGAGGACAAAAAATAAGATCCATGGAATTGCTTAACTCAGGGAATTTGGTGTTGCTTGGGGAAAATGGGACAACTATTTGGCAAAGTTTTAGCCATCCCACTGATACTCTTTTGCCCGGACAAGACTTTGTGGAAGGAATGACACTCAAAAGCTTCCACAACAGCTTGAACATGTGTCATTTTCTTAGTTACAAGGCAGGTGATTTAGTTCTCTATGCAGGATTTGAAACTCCACAAGTGTACTGGTCCCTATCAGGAGAACAAGCTCAGGGAAGCTCAAAAAATAACACTGGTAAGGTTCACTCAGCGTCTTTGGTGTCCAATTCATTGAGTTTTTATGACATAAGTAGAGCTTTGCTATGGAAAGTTGTCTTCTCTGAGGACTCAGATCCCAAGTCATTGTGGGCTGCTACCTTGGATCCAACTGGTGCAATCACTTTTTATGATCTCAACAAAGGGAGGGCTCCTAACCCTGAGGCAGTTAAGGTACCACAAGACCCTTGTGGCATTCCTCAGCCTTGTGATCCTTATTATGTTTGCTTCTTTGAAAACTGGTGCATCTGCCCGAAACTTCTCAGGACTCGCTATAATTGCAAACCTCCCAACATCTCCACCTGTTCTAGGAGTTCAACGGAACTTTTATATGTTGGTGAAGAGCTTGATTATTTTGCTCTCAAGTACACTGCTCCGGTTTCCAAATCAAACCTGAATGCTTGCAAAGAGACTTGTTTAGGAAACTGTTCATGCCTTGTGCTTTTCTTTGAAAACAGTACCGGAAGATGCTTTCATTTTGATCAGACTGGGAGTTTCCAACGCTATAAGAGGGGTGCAGGTGCTGGTGGTTATGTTTCGTTCATGAAGGTCTCCATTAGTAGTGCTAGTGATGATGGACATGGCAACAAAAATGGAAGGAATGACATGGTGCTAGTTGTTGTCATAGTTCTCACAGTTCTGGTTATAGTTGGTCTTATAACAGGATTCTGGTACTTATTCAAGAGGAAGAAGAATGTTGCTAAGTATCCTCAAGATGACTTGGATGAAGATGATGATTTCTTGGACAGTCTCTCTGGAATGCCTGCACGCAGAGTGGAACTTTTCTTTGTTTTGTCTGGTGAGTGGCGATCTTCTCGTGATTTTCCCTTTGTTTCTGGGCATCGGACCTAA 1302 0.427 MHLSSYKVVWTANRGLLVGTSDKFVLDHDGNAYLEGGNGVVWATNTRGQKIRSMELLNSGNLVLLGENGTTIWQSFSHPTDTLLPGQDFVEGMTLKSFHNSLNMCHFLSYKAGDLVLYAGFETPQVYWSLSGEQAQGSSKNNTGKVHSASLVSNSLSFYDISRALLWKVVFSEDSDPKSLWAATLDPTGAITFYDLNKGRAPNPEAVKVPQDPCGIPQPCDPYYVCFFENWCICPKLLRTRYNCKPPNISTCSRSSTELLYVGEELDYFALKYTAPVSKSNLNACKETCLGNCSCLVLFFENSTGRCFHFDQTGSFQRYKRGAGAGGYVSFMKVSISSASDDGHGNKNGRNDMVLVVVIVLTVLVIVGLITGFWYLFKRKKNVAKYPQDDLDEDDDFLDSLSGMPARRVELFFVLSGEWRSSRDFPFVSGHRT 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03273 433 Pfam D-mannose binding lectin 8 89 IPR001480 -
Gma13g03273 433 Gene3D - 12 91 IPR036426 -
Gma13g03273 433 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 1 407 - -
Gma13g03273 433 SUPERFAMILY alpha-D-mannose-specific plant lectins 4 130 IPR036426 -
Gma13g03273 433 CDD B_lectin 4 79 IPR001480 -
Gma13g03273 433 SMART blect_4 2 79 IPR001480 -
Gma13g03273 433 ProSiteProfiles Bulb-type lectin domain profile. 1 77 IPR001480 -
Gma13g03273 433 ProSiteProfiles PAN/Apple domain profile. 252 323 IPR003609 -
Gma13g03273 433 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03273 Gma-Chr13 46711406 46713859 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03273 - - gmx:100786024 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03273 13 46711406 46713859 Gma15g00078 15 656600 659548 ECH
Gma13g03273 13 46711406 46713859 Gma13g03273 13 46711406 46713859 ECH
Gma13g03273 13 46711406 46713859 Gma15g00078 15 656600 659548 GST