Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma13g03234 | ATGAGGTATGATGTGTACCAAGGTCCTGATGCTGAGTTGGCGGAAATGCTAGAAAGGGATGGATGTGGAATAAGGAGACCCTGGAAAGGTGTTATCGTGTTCGGACCTCCAGGAACTGGGAAGACGCTTCTTGCTAAAGGAGTTGCTACTGAATGTGAGAGCGAGCGCATGGTTCGGTGCTTGTTTGATCTTGCAAGAGCATATGCCCCCAGTACAATTTTCATTGATGAAATTGATTCTCTATGCAATGCTAGGGGGGCTTCTGGGGAGCATGAATCATCCAGAAGGGTCAAGTCTGAACTTCTAGTTCAGGTGGCCCCTGATGTGAACATAGATGAAGTGGCTCGACGGACAGAGGGGTATAGTGGAGATGACTTGACAGATGTATGCCGTGATGCTTCCATGAATGGTATGAGGCGTAAGAAAGTCCAACCAAGTGTTTCTCTGGCTGACATTGAACGCCATGAGAAGTGGTTTGCCGAATTTGGATCAGCATAA | 498 | 0.4759 | MRYDVYQGPDAELAEMLERDGCGIRRPWKGVIVFGPPGTGKTLLAKGVATECESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVAPDVNIDEVARRTEGYSGDDLTDVCRDASMNGMRRKKVQPSVSLADIERHEKWFAEFGSA | 165 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma13g03234 | 165 | CDD | AAA | 25 | 81 | - | - | |
Gma13g03234 | 165 | PANTHER | KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 | 141 | 165 | - | - | |
Gma13g03234 | 165 | PANTHER | KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 | 103 | 141 | - | - | |
Gma13g03234 | 165 | Gene3D | - | 23 | 53 | IPR027417 | - | |
Gma13g03234 | 165 | Gene3D | - | 54 | 101 | IPR027417 | - | |
Gma13g03234 | 165 | SMART | AAA_5 | 27 | 133 | IPR003593 | - | |
Gma13g03234 | 165 | PANTHER | KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 | 23 | 105 | - | - | |
Gma13g03234 | 165 | Pfam | AAA+ lid domain | 108 | 153 | IPR041569 | - | |
Gma13g03234 | 165 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 19 | 154 | IPR027417 | - | |
Gma13g03234 | 165 | PANTHER | AAA DOMAIN-CONTAINING | 23 | 105 | - | - | |
Gma13g03234 | 165 | Pfam | ATPase family associated with various cellular activities (AAA) | 53 | 106 | IPR003959 | GO:0005524|GO:0016887 | |
Gma13g03234 | 165 | Gene3D | - | 102 | 160 | - | - | |
Gma13g03234 | 165 | PANTHER | AAA DOMAIN-CONTAINING | 141 | 165 | - | - | |
Gma13g03234 | 165 | PANTHER | AAA DOMAIN-CONTAINING | 103 | 141 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma13g03234 | Gma-Chr13 | 46411832 | 46413681 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma13g03234 | 26 | 105 | Calmodulin-binding Proteins | AT3G56690 | 46.465 | 1.56e-17 | 77.0 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma13g03234 | 13 | 46411832 | 46413681 | Gma15g00121 | 15 | 991961 | 995309 | GST | |
Gma13g03234 | 13 | 46411832 | 46413681 | Gma07g00319 | 07 | 2708291 | 2712312 | PCT | |
Gma13g03234 | 13 | 46411832 | 46413681 | Gma08g01905 | 08 | 17155805 | 17159947 | PCT | |
Gma07g00319 | 07 | 2708291 | 2712312 | Gma13g03234 | 13 | 46411832 | 46413681 | PCT | |
Gma08g01905 | 08 | 17155805 | 17159947 | Gma13g03234 | 13 | 46411832 | 46413681 | PCT |