Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03219 ATGGGTGTGAACTCCAACAGAGTGGAACACTTTGCTAGCCATGATAGCGCCATCGAGGAGACAATGCAAATCCATGCAGTGCAGTTGCCACCACACCAGACCACACTCCACAAACTCAGGCACAGAGTCTCCGAAATCTTCTTCCCAGATGACCCTCTCCACCGTTTCAAGAACCAAACTCGCTTTAAAAAGTTCCTCCTCGCACTTCAGTATCTCTTCCCCATTTTCGACTGGGCCCCAAACTACAATCTTACCCTTCTCCGCTCTGACCTCATCTCTGGCCTCACCATTGCCAGCCTCGCCATTCCTCAGGGAATCAGTTATGCCAAGCTTGCCAACTTGCCACCTATTCTTGGATTATATTCGAGTTTTGTTCCCCCATTGATATACTCGCTGCTTGGAAGTTCTAGACATCTTGGTGTTGGACCTGTTTCCATTGCGTCTTTGGTCATGGGATCAATGTTAAGTGATAAAATTTCTTACACTCAAGAACCTATTCTCTATCTGGGATTGGCTTTCACCGCCACTTTCTTTGCTGGTGTATTCCAAGCTTCTCTGGGTATATTAAGGCTAGGCTTCGTAATTGATTTTCTGTCGAAGGCAACGCTGGTTGGATTCACAGGCGGTGCTGCCATTATTGTGTCACTGCAGCAGCTGAAAGGTTTACTTGGAATAGTGCACTTTACCAGCAAGATGCAAATAATTCCAGTAACGATCTCTGTTTTCAAGCAAAGACACGAGTGGTCATGGCAAACCATTCTTTTGGGATTCGGCTTCCTGGTCTTCTTGCTGACAACAAGGCACATTAGTTTGAGGAAACCAAAACTATTCTGGGTTTCAGCAGCTGCCCCATTGACATCAGTTATTCTGTCAACCATTTTAGTCTTTCTTCTGAGAAATAAGACTCATCAAATTTCAGTTATTGGGCACTTACCAAAGGGAGTTAATCCACCATCAGCAAACATGTTATACTTCAATGGTCCTTACTTGGCTCTTGCTATCAAAACTGGCATCATCACAGGGATCTTATCTCTCACTGAAGGAATTGCAGTAGGGAGAACATTTGCTTCACTTAAGAACTACCAGGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTAATGAACATAGCTGGCTCTTGTTCTTCATGTTATGTTACAACGGGATCCTTTTCTCGATCGGCTGTTAACTATAATGCTGGAGCACAGACAACAGTTTCAAATATAATCATGGCTGCAGCTGTTCTAGTGACACTTCTGTTTCTCATGCCTCTTTTCTACTATACACCAAATGTTGTCTTAGCGGCCATTATCATCACTGCTGTGATTGGTCTAATAGATTATCAATCTGCATATAAATTGTGGAAGGTTGACAAACTTGATTTCTTGGCCTGTTTGTGCTCCTTTTTTGGGGTTCTGTTCATTTCAGTGCCTTTAGGTCTTGGTATAGCGGTTATCATATCAGTCCTCAAGATCCTGCTTCATGTCACTCGACCAAACACTTTGGTTTTGGGGAATATACCAGGAACACAAATATTCCACAACATAAACCAATACAAAAAAGCTTTAAGAGTTCCTTCATTTCTCATTTTGGCTGTTGAGTCTCCAATCTATTTTGCTAACTCAACTTATCTTCAAGAAAGGATACTGAGATGGGTTCGAGAAGAGGAAGAGCATATAAAAGCTAATAATGGAGCTCCATTGAAGTGCATAATTTTAGACATGACAGCTGTCACAGCCACAGACACAAGTGGGCTTGACACTTTATGTGAACTTAGAAAGATGCTGGAGAAGAGATCACTTGAGTTTGTGCTGGCAAATCCTGTTGGAAATGTGATGGAAAAATTGCATAAGTCAAACATTTTGGATTCTTTTGGATTAAAAGGAGTCTATCTCACAGTGGGAGAAGCTGTGACTGACATTTCATCAATCTGGAAAGCTCAGCCTTGA 1950 0.4236 MGVNSNRVEHFASHDSAIEETMQIHAVQLPPHQTTLHKLRHRVSEIFFPDDPLHRFKNQTRFKKFLLALQYLFPIFDWAPNYNLTLLRSDLISGLTIASLAIPQGISYAKLANLPPILGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSDKISYTQEPILYLGLAFTATFFAGVFQASLGILRLGFVIDFLSKATLVGFTGGAAIIVSLQQLKGLLGIVHFTSKMQIIPVTISVFKQRHEWSWQTILLGFGFLVFLLTTRHISLRKPKLFWVSAAAPLTSVILSTILVFLLRNKTHQISVIGHLPKGVNPPSANMLYFNGPYLALAIKTGIITGILSLTEGIAVGRTFASLKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTTVSNIIMAAAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQSAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVIISVLKILLHVTRPNTLVLGNIPGTQIFHNINQYKKALRVPSFLILAVESPIYFANSTYLQERILRWVREEEEHIKANNGAPLKCIILDMTAVTATDTSGLDTLCELRKMLEKRSLEFVLANPVGNVMEKLHKSNILDSFGLKGVYLTVGEAVTDISSIWKAQP 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03219 649 PANTHER SLC26A/SULP TRANSPORTER-RELATED 20 649 - -
Gma13g03219 649 SUPERFAMILY SpoIIaa-like 524 639 IPR036513 -
Gma13g03219 649 CDD STAS_SulP_like_sulfate_transporter 519 634 - -
Gma13g03219 649 Pfam Sulfate permease family 87 466 IPR011547 GO:0016021
Gma13g03219 649 TIGRFAM sulP: sulfate permease 74 637 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma13g03219 649 Pfam STAS domain 519 637 IPR002645 -
Gma13g03219 649 Gene3D STAS domain 498 642 IPR036513 -
Gma13g03219 649 ProSitePatterns SLC26A transporters signature. 116 137 IPR018045 GO:0008271|GO:0008272
Gma13g03219 649 PANTHER SULFATE TRANSPORTER 20 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma13g03219 649 ProSiteProfiles STAS domain profile. 518 641 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03219 Gma-Chr13 46258547 46263695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03219 1 649 Inorganic Solute Cotransporters AT3G15990 76.110 0.0 1031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03219 K17471 - gmx:100815251 1257.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03219 13 46258547 46263695 Gma13g03219 13 46258547 46263695 ECH
Gma13g03219 13 46258547 46263695 Gma15g00135 15 1151275 1156648 GST
Gma13g03219 13 46258547 46263695 Gma07g00058 07 467313 471386 PCT
Gma13g03219 13 46258547 46263695 Gma08g01896 08 17023808 17027750 PCT
Gma07g00058 07 467313 471386 Gma13g03219 13 46258547 46263695 PCT
Gma08g01896 08 17023808 17027750 Gma13g03219 13 46258547 46263695 PCT