Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03214 ATGAGCGTGGTTGGATTTGATTTTGGTAATGAGAGCTGCATTGTTGCTGTCGCAAGACAAAGGGGGATTGACGTTGTGCTCAACGATGAGTCAAAGCGTGAAACACCTGCAATTGTATGCTTTGGTGACAAACAGCGGTTCCTTGGGACAGCCGGGGCTGCTTCTACTATGATGAACCCAAAGAATTCCATCTCACAGATAAAGAGGTTAATTGGCAGACAATTTGCGGATCCGGAATTGCAGCAAGATATCAAGACGTTCCCCTTTGTGGTCACTGAAGGACCTGATGGATATCCTTTAATTCATGCACGGTACTTGGGTGAATCTAGAACATTTACACCTACCCAAGTATTTGGAATGATGTTATCAAACCTTAAAGAAATAGCTGAGAAAAATTTGAATGCTGCTGTTGTTGATTGCTGCATTGGAATTCCACTTTATTTTACCGATCTTCAAAGGAGGGCAGTCTTGGATGCTGCCACTATTGCAGGTTTGCACCCACTTCGTCTGTTTCATGAAACAACAGCAACTGCATTGGCTTATGGAATTTATAAGACTGATCTTCCTGAAAATGATCAGCTGAATGTTGCATTTGTTGATGTTGGACATGCTAGCATGCAAGTATGCATTGCTGGATTTAAAAAGGGGCAGCTGAAAGTGTTGTCCCAATCATATGATAGGTCCCTAGGTGGTAGGGACTTTGACGAGGTTCTGTTCAACCATTTTGCTGCAAAGTTTAAGGAGGAGTACAAGATTGATGTATTCCAAAATGCCAGGGCTTGTCTGAGGTTGAGGGCTGCCTGCGAGAAGCTGAAGAAGGTGCTTagtgctaatccggaggcccctttgaacattgagtgcttaatggatgagaaggatgtcagaggctttatcaagcgtgatgagtttgagCAACTAAGTCTTCCAATTTTGGAACGGGTGAAGGGACCTTTGGAGAAGGCACTTGCAGAGGCAGGTCTTACAGTCGAAAATGTGCACATGGTTGAGGTGGTTGGTTCTGGATCTCGTGTACCAGCTATAAACAAAATATTGACAGAGTTCTTCAAAAAGGAGCCTAGGCGGACAATGAATGCTAGTGAGTGTGTTGCCAGGGGTTGTGCATTGCAGTGTGCAATTCTCAGTCCAACTTTTAAAGTACGGGAGTTTCAGGTCAACGAAAGCTTTCCTTTCTCAATTTCTCTCTCGTGGAAAGCTCCAAGTTCTGATGCACAGGAAAGTGGACCAGATAATAAACAAAGTACCCTTGTTTTCCCCAAGGGAAATCCCATACCAAGTGTCAAGGCACTGACCATCTACAGGTCAGGAACCTTTTCTATTGATGTTCAGTATGATGACGTGAGTGGTTTGCAAACACCTGCAAAGATCAGCACATATACTATTGGCCCTTTCCAATCTACAAAAAATGAAAAAGCAAAAGTTAAAGTGAAAGTTCGGTTGAATGTGCATGGAATTATATCTGTCGAATCTGCAACTCTACTGGAAGAGGAAGAAGAAATTGAGGTTCCAGTTTACAAAGAACCTGCAGGAGAAAATTCCAAGATGGAAACTGATGAAGCTCCTGCTGATGCTGCTGCTGCTGCTGCAACTCCTAGCACCAATGACAATGATGTTAGCATGCAAGATGCTAATACCAAGGCAACTGCTAATGCCCCTGGAGCCGAAAATGGTACCCCTGAGGCAGGAGATAAGCCTGTGCAGATGGATACTGATACCAAGGTTGAGGCTCCAAAGAAGAAAGTTAAGAAAATAAACATTCCTGTGGTAGAGTTAGTTTATGGAGCAATGGCAGCCACAGATGTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATAGAGTCATGGAGGAAACGAAAGATAAGAAAAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTCATTGATTCAGAGAGGGAAGCATTTACTGCTAAACTTCAGGAGGTGGAAGACTGGCTATATGAGGATGGTGAAGATGAAACTAAAGGCGTATACATTGCCAAGCTAGAAGAGCTCAAGAAGCAAGGTGATCCAATTGAAGAGCGTTACAAGGAATACATGGAGAGGGGTACAGTAATTGATCAACTTGCCTATTGTATAAATAGTTATAGAGAAGCTGCAATGTCAAATGATCCCAAGTTTGATCACATTGACATCAATGAGAAACAAAAGGTCTTAAATGAATGTGTGGAAGCTGAGAACTGGCTCAGGGAGAAAAAACAGCATCAGGACTCGCTTCCAAAATATGCCACCCCTGTACTTTTGTCAGCTGACGTAAGAAAGAAAGCTGAAGCTGTGGACAGGTTTTGTAAGCCAATTATGACGAAACCAAAGCCACTGCCACCCAAGCCAGCTACACCAGAAGCACCAGCAACCCCACCTCCTCAGGGTGGTGAGCAGCAGCAACAACCACCTCAGGAGAATCCTAATGCCAGTACTAATGAAAATGCTGGGGACAATGCTAATCCAGCCCCGCCACCAGCATCTGCTGAACCAATGGAGACTGACAAACCAGAGAACACAGGCTCTGCTTAA 2592 0.4217 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFLGTAGAASTMMNPKNSISQIKRLIGRQFADPELQQDIKTFPFVVTEGPDGYPLIHARYLGESRTFTPTQVFGMMLSNLKEIAEKNLNAAVVDCCIGIPLYFTDLQRRAVLDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLSQSYDRSLGGRDFDEVLFNHFAAKFKEEYKIDVFQNARACLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGFIKRDEFEQLSLPILERVKGPLEKALAEAGLTVENVHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKAPSSDAQESGPDNKQSTLVFPKGNPIPSVKALTIYRSGTFSIDVQYDDVSGLQTPAKISTYTIGPFQSTKNEKAKVKVKVRLNVHGIISVESATLLEEEEEIEVPVYKEPAGENSKMETDEAPADAAAAAATPSTNDNDVSMQDANTKATANAPGAENGTPEAGDKPVQMDTDTKVEAPKKKVKKINIPVVELVYGAMAATDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVIDSEREAFTAKLQEVEDWLYEDGEDETKGVYIAKLEELKKQGDPIEERYKEYMERGTVIDQLAYCINSYREAAMSNDPKFDHIDINEKQKVLNECVEAENWLREKKQHQDSLPKYATPVLLSADVRKKAEAVDRFCKPIMTKPKPLPPKPATPEAPATPPPQGGEQQQQPPQENPNASTNENAGDNANPAPPPASAEPMETDKPENTGSA 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03214 863 Gene3D - 602 711 IPR029048 -
Gma13g03214 863 CDD HSPA4_like_NDB 2 381 - -
Gma13g03214 863 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 604 702 IPR029048 -
Gma13g03214 863 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 635 IPR029047 -
Gma13g03214 863 Gene3D - 186 360 - -
Gma13g03214 863 PANTHER HSC70CB, ISOFORM G-RELATED 1 862 - -
Gma13g03214 863 MobiDBLite consensus disorder prediction 789 863 - -
Gma13g03214 863 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Gma13g03214 863 MobiDBLite consensus disorder prediction 794 819 - -
Gma13g03214 863 Pfam Hsp70 protein 3 703 IPR013126 GO:0005524|GO:0140662
Gma13g03214 863 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Gma13g03214 863 Coils Coil 688 708 - -
Gma13g03214 863 MobiDBLite consensus disorder prediction 820 839 - -
Gma13g03214 863 PRINTS 70kDa heat shock protein signature 2 15 - -
Gma13g03214 863 PRINTS 70kDa heat shock protein signature 30 42 - -
Gma13g03214 863 PRINTS 70kDa heat shock protein signature 140 160 - -
Gma13g03214 863 PRINTS 70kDa heat shock protein signature 332 348 - -
Gma13g03214 863 PRINTS 70kDa heat shock protein signature 363 383 - -
Gma13g03214 863 PRINTS 70kDa heat shock protein signature 477 493 - -
Gma13g03214 863 Gene3D - 5 374 - -
Gma13g03214 863 MobiDBLite consensus disorder prediction 535 558 - -
Gma13g03214 863 Gene3D - 38 113 - -
Gma13g03214 863 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 862 - -
Gma13g03214 863 Gene3D Actin; Chain A, domain 4 230 313 - -
Gma13g03214 863 MobiDBLite consensus disorder prediction 512 573 - -
Gma13g03214 863 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 528 IPR029047 -
Gma13g03214 863 ProSiteProfiles Ig-like domain profile. 345 463 IPR007110 -
Gma13g03214 863 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 713 800 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03214 Gma-Chr13 46235965 46239655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03214 4 401 Calmodulin-binding Proteins AT1G16030 36.908 6.76e-86 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03214 K09489 - gmx:100813658 1588.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03214 13 46235965 46239655 Gma13g03214 13 46235965 46239655 ECH
Gma13g03214 13 46235965 46239655 Gma15g00141 15 1170995 1176511 GST
Gma13g03214 13 46235965 46239655 Gma07g00056 07 456493 463541 PCT
Gma13g03214 13 46235965 46239655 Gma08g01894 08 17012537 17019795 PCT
Gma07g00056 07 456493 463541 Gma13g03214 13 46235965 46239655 PCT
Gma08g01894 08 17012537 17019795 Gma13g03214 13 46235965 46239655 PCT