Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03208 ATGGAAAAGGAGGGCAACGTACTCTGGTATACTGATACTGTTGAATTGAATAGTAGTAGTGTAGCAAGGGGCATGGCTTTGGTGGAGAGGGTTCAAGTTCGAATTCCTCTCCTGTTATTATTAACACTAACACCAACGGCTGTAGCTGTAGGCTTTCGGTGTTGGGAAAGGACCACGTGTCCAGCGTTGCTTGGTTACAAGTCACCAGTCCCAACCACCATAGGGGCCATTCAGAGACTCTTCAACGTCACTGGCGTCGCAGACATTCTCGCCGCTAACAACCTCCCTGAGTGGACCCTACCAAACAATTTCACGGTGGAGGAGAATCGCCTTTTACGGATTCCCTTGGAGTGCGATTGCAGTGGGCCTGGGTTGTACGGAGAGCCCTCTAACCCCCTCGTTTACACTGTGCGGAAGGGTGACAATATTTCTTATCTAGCAACCACTGTGTTCTCCGGTTTGGTGGCTTCAACGGATATCCAACATGGGAACAACGTGACCAATTTAAGGACGGGACAAGAACTGCGAGTGCCACTACCTTGTAGCTGTGGGAAGGTCAACGGGCTTGACGTTCTCCATTTTGGATTGACGCTGGAATACGGGAGCACTACCTTGGAACAGATAGCTCATGAGTACCATGTCTCTTCACAAACCATTACAACTTCCAACCAACCTCATCTTATGTTTGGTCGGGCTTTGGATATTCCACTCCCAGTTTGTTCCTCGATGGTCAGAAAAGACTCTTTGGACCACCCTTTACTTGTTCCAAATGGTTCTTATGTCTACACCGCAAATGGCTGTGTGAAATGCTACTGTGATGCTACCAAAAATTGGAAATTAACATGTGAGCCATCCAAGCTTAGACCAACTAATTGGTCTACTTGCCCATCCATGAAATGTGACAGTTCAATTTCAAGCAACATGTATATTGGTGACACCACATATTCAAGTTCTCACAATCTTGCAATTTGTGCCTACGCTGGTTATGGAACTCAAACTATCTTCACTACTCTAACAGCAGTGTATATTCCTCCTGGTTTAGTGCACGCGCATCACACGAAAAGCAGATGGTGGGCCTGGCTTATTGTGATAGCAGGAGTTTTTGTTGTACTTATATTCGGCTACTTGTGCTGCATCATCTGGAGAAAATGCAAAATAGAAGCTGACAGAAAAAAGAAGCAGAAGGAACTACTATTAGAAATTGGAGTCAGTTCTGTGGCTTGCATTGTGTATCACAAAACAAAAAGACACAGAAAACGTAGCAAGGTCAACTATGAAATGCAAATatttagctttccaatcattgctgctgcaacaggcaacttttcagttgcaaacaagttagggcagggtggttttggaccagtttacaagggagtacttcctgatggacaagaaatagcaataaagagactttctagtagatcggggcaagggttggtggagtttaagaatgaggctgaactggtagcaaaattgcagcatactaatcttgtaaggctttcggggctctgcatacaaaatgaagaaaacatattaatctacgagtacttgcccaacaaaagtttagactttcatctctttgattctaaaagaagggaaaaaatagtttgggagaaaagattcaacatcattgaaggtatagctcatgggttgatttatcttcatcatttttcaagattaaaagtgattcaccgcgatttgaaggcaggtaacatattacttgattatgaaatgaacccaaaaattagtgattttggcatggcagtaatattggattcagaagtagtagaagtgaaaacaaaaagagttgttggaacatatggttacatgtctcctgagtacgtcataaaaggcattatctcaacaaagactgatgtgtttagctatggagtcctagtgcttgagattgtaagtgggaagaaaaataattctcgctatcaggctgattaccccctcaaccttattggatttGCATGGCAACTATGGAATGAAGGTAAAGGTGTTGAGTTGATAGATTCATCAATGCTTGAATCATGCCGGACAGCTGAAGTATTGCGATGCACTCAGTCCGCGGGGGCAAAGAGATCGAGGAAGGTGATAATGGAATTTTGGCCAGAATTTCTTGCTAGTAGTACGGGTAAAGAGTTTGTGGCTGGAGGATTTGGAGGCACTGCTGGTATAATCTCAGGTTACCCATTAGACACGCTCCGTGTGATGCAACAAAGCTCCAACAATGGCTCTGCTGCCTTCACCATCCTCAGAAATTTGGTGGCCAAGGAAGGACCAACTGCTCTGTACCGTGGCATGGCTGCACCTTTGGCCTCTGTTACATTTCAGAACGCTATGGTTTTCCAAATTTACGCAGTTCTCTCTAGGGCATTTAGCACGTCCGTTTCTGTCAACGACCCTCCTTCCTACAAGGGTGTTGCTTTAGGAGGATTTTGCTCTGGCGCTTTGCAGAGCATGCTGCTCTCCCCTGTTGAGTTAGTTAAAATTCGCCTTCAGCTTCAGAACACAGGACAATCCACAGAACCACAAAAGGGTCCCATAAAGGTCGCCAACAACATATGGAAAAGAGAGGGTCTTCGTGGCATTTATCGAGGACTTGGCATCACTATGCTAAGAGATGCACCTGCACATGGCCTCTACTTTTGGACATATGAATATGCGAGGGAGAAACTTCACCCAGGTTGTAGAAGAAGTTGTCAAGAGACCTTGAATACTATGTTGGTATCAGGAGGATTGGCTGGGGTTGTGAGTTGGGTTTTTAGCTACCCTTTGGACGTTATAAAGACAAGATTGCAGGCTCAGACACTTTCTTCGCGGAAATACAAAGGCATTTTGGATTGTCTTCGGAAGAGCGTTGAAGAGGAAGGATACGTTGTGCTATGGCGGGGTTTAGGAACTGCGGTTGCTAGAGCCTTTGTTGTGAATGGTGCTATATTTTCTGCTTATGAGATCACTCTTAGGTGTCTGTTTGACAAATAA 2991 0.3527 MEKEGNVLWYTDTVELNSSSVARGMALVERVQVRIPLLLLLTLTPTAVAVGFRCWERTTCPALLGYKSPVPTTIGAIQRLFNVTGVADILAANNLPEWTLPNNFTVEENRLLRIPLECDCSGPGLYGEPSNPLVYTVRKGDNISYLATTVFSGLVASTDIQHGNNVTNLRTGQELRVPLPCSCGKVNGLDVLHFGLTLEYGSTTLEQIAHEYHVSSQTITTSNQPHLMFGRALDIPLPVCSSMVRKDSLDHPLLVPNGSYVYTANGCVKCYCDATKNWKLTCEPSKLRPTNWSTCPSMKCDSSISSNMYIGDTTYSSSHNLAICAYAGYGTQTIFTTLTAVYIPPGLVHAHHTKSRWWAWLIVIAGVFVVLIFGYLCCIIWRKCKIEADRKKKQKELLLEIGVSSVACIVYHKTKRHRKRSKVNYEMQIFSFPIIAAATGNFSVANKLGQGGFGPVYKGVLPDGQEIAIKRLSSRSGQGLVEFKNEAELVAKLQHTNLVRLSGLCIQNEENILIYEYLPNKSLDFHLFDSKRREKIVWEKRFNIIEGIAHGLIYLHHFSRLKVIHRDLKAGNILLDYEMNPKISDFGMAVILDSEVVEVKTKRVVGTYGYMSPEYVIKGIISTKTDVFSYGVLVLEIVSGKKNNSRYQADYPLNLIGFAWQLWNEGKGVELIDSSMLESCRTAEVLRCTQSAGAKRSRKVIMEFWPEFLASSTGKEFVAGGFGGTAGIISGYPLDTLRVMQQSSNNGSAAFTILRNLVAKEGPTALYRGMAAPLASVTFQNAMVFQIYAVLSRAFSTSVSVNDPPSYKGVALGGFCSGALQSMLLSPVELVKIRLQLQNTGQSTEPQKGPIKVANNIWKREGLRGIYRGLGITMLRDAPAHGLYFWTYEYAREKLHPGCRRSCQETLNTMLVSGGLAGVVSWVFSYPLDVIKTRLQAQTLSSRKYKGILDCLRKSVEEEGYVVLWRGLGTAVARAFVVNGAIFSAYEITLRCLFDK 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03208 996 Gene3D Phosphorylase Kinase; domain 1 404 517 - -
Gma13g03208 996 Pfam Mitochondrial carrier protein 910 995 IPR018108 -
Gma13g03208 996 Pfam Mitochondrial carrier protein 712 797 IPR018108 -
Gma13g03208 996 Pfam Mitochondrial carrier protein 812 895 IPR018108 -
Gma13g03208 996 SMART serkin_6 442 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g03208 996 SUPERFAMILY Protein kinase-like (PK-like) 421 686 IPR011009 -
Gma13g03208 996 Gene3D Transferase(Phosphotransferase) domain 1 518 703 - -
Gma13g03208 996 ProSiteProfiles Solute carrier (Solcar) repeat profile. 711 794 IPR018108 -
Gma13g03208 996 ProSiteProfiles Solute carrier (Solcar) repeat profile. 905 992 IPR018108 -
Gma13g03208 996 PRINTS Mitochondrial carrier protein signature 867 885 IPR002067 GO:0055085
Gma13g03208 996 PRINTS Mitochondrial carrier protein signature 716 729 IPR002067 GO:0055085
Gma13g03208 996 PRINTS Mitochondrial carrier protein signature 914 936 IPR002067 GO:0055085
Gma13g03208 996 ProSiteProfiles Protein kinase domain profile. 442 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g03208 996 SUPERFAMILY Mitochondrial carrier 714 987 IPR023395 -
Gma13g03208 996 Pfam Protein kinase domain 443 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g03208 996 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 702 995 - -
Gma13g03208 996 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 702 995 - -
Gma13g03208 996 Pfam LysM domain 135 178 IPR018392 -
Gma13g03208 996 Gene3D Mitochondrial carrier domain 713 995 IPR023395 -
Gma13g03208 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 563 575 IPR008271 GO:0004672|GO:0006468
Gma13g03208 996 ProSiteProfiles Solute carrier (Solcar) repeat profile. 805 894 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03208 Gma-Chr13 46192462 46201772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03208 702 996 Antiporters AT1G79900 69.831 1.35e-135 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma13g03208 Pkinase 5.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03208 K15109 - gmx:100811504 1400.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03208 13 46192462 46201772 Gma13g03208 13 46192462 46201772 ECH