Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03192 ATGTCTAGAGCATTGGAACATGATTACATAGGGTTGGCAGAGAATCCGTCAATGGATGGTAAAAACTCATCATCACTGAACTTGAAGGAGACAGAGCTGAGGCTTGGCCTCCCTGGTTGCGAGTCTCCAGAGAGAAAATCAGGTTCTGCACTCTGTCTTTTTGGCAAAGAGTTGCAGAACAACAATAACAATGTTTGTTCTTTGAAGGCTGGGGCCAAGAGGGGCTTCTCTGATGCCATTGACACCTCTTCTGTCACTGAGGGATCTCAAGGAGCTTCTGCTTTGTTCTCTCCAAGAGGTGGCAATGTTGGGAAGCCTCTTATTGGTTTAGACACTCAAACTAACACCACCATCAAAGAGGTTGGTGCAGTTCCTCAATCAGCCAAACCGGTTCAGGAAAACAATGATCAGTTTGCTGCAACAAATGCCCATGCAATTGCTCCTGCTGCTAAGGCACAAGTTGTGGGATGGCCACCAATTCGATCTTTCCGAAAGAACACGATGGCCTCTAATTTGACAAAGAACAATGATGAAGCTGAGGGAAAATCAGGATTTGGTTGTCTCTATGTGAAAGTCAGTATGGATGGTGCCCCTTATCTTAGAAAGGTTGATCTCAAAACCTATAACAACTATATGGAACTTTCCTCAGCTCTTGAGAAGATGTTCAGCTGCTTCACCATTGGTCAATGCAATTCTCCTGGACTTCCTGGGAAAGATGGACTAAGTGAGAGCTCTTTGAGGGATCTTCTCCATGGATCTGAATATGTTCTTACATATGAAGATAAAGATGGAGACTGGATGCTTGTGGGTGATGTTCCTTGGGAGATGTTCACTGATTCATGTCGGAGACTAAGGATCATGAAGGGCTCTGAGGCAATTGGGCTAGCTCCAAGGGCCATGGAAAAATCTAGGAGCCAAAACTAA 924 0.4491 MSRALEHDYIGLAENPSMDGKNSSSLNLKETELRLGLPGCESPERKSGSALCLFGKELQNNNNNVCSLKAGAKRGFSDAIDTSSVTEGSQGASALFSPRGGNVGKPLIGLDTQTNTTIKEVGAVPQSAKPVQENNDQFAATNAHAIAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKSGFGCLYVKVSMDGAPYLRKVDLKTYNNYMELSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAMEKSRSQN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03192 307 SUPERFAMILY CAD & PB1 domains 187 288 - -
Gma13g03192 307 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 18 299 IPR003311 GO:0005634|GO:0006355
Gma13g03192 307 Gene3D - 182 301 - -
Gma13g03192 307 PANTHER AUXIN-RESPONSIVE PROTEIN 18 299 - -
Gma13g03192 307 ProSiteProfiles PB1 domain profile. 187 289 IPR000270 GO:0005515
Gma13g03192 307 Pfam AUX/IAA family 30 298 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03192 Gma-Chr13 46026142 46028667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03192 189 301 B3 DNA Binding Superfamily AT1G19850 32.174 3.01e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gma13g03192 AUX_IAA 9e-93 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03192 K14484 - gmx:100806699 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03192 13 46026142 46028667 Gma13g03192 13 46026142 46028667 ECH