Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03186 AGCTTGATGAAGGATGCACTTGTTAAGTCAGTAGATGGAGGCAAAGTTCAAGAAACTGGCTGTAGCACATCTAGCAATATTTCAAATGAACATCTCACGAAGGTAGTTGCTGACTCAGCTACTAGTTCAAGCCAGTTGCAGGATAATGCTGAAAACAGAGTGCTAGAAGGAGATTCATCTGTCTCCACCGAAAAGCATTCAATTTCTGTTGGTGCTTCCCTATTTCGTTTTATTAAAGGAAAAGGGGGATCCACACAGAAAAAGATAGAAGAGGATATGGGGGTTAAAATCATAATACCTACTTCAAAAGAAGAGGATTTTTTAGTAACCACTGAAGGCATTTCAATCAACAGCGGGAATTCAGCTTCAGAGAAGATACAGGCTATAATTGATGAGACGGTTAATAGTCGAAGTCTTGATTATTCACACTTCATATCCCTTCCATTGGCCATTCATCCTGAGTTAGTTGATAAACTCATCAATTTTCAACATTCAATATTGGAAATTGGTTCTTGCATGGATGAGAATACTGATACTGAGACTGATTCCAATGAGGATGAGAGTACTACTACTGACACCAAAAAAGTGGATCAACTATCAAAGGAAAATTCTGGTGTTGCAGTTGAGCTTAAAGTTAATGACAACAGTAAATCGGTTAAAGTTAATGTTACTAACATACCCCTTGTCAGTTATGCACCTAAAGCATCCAAGTCTTCCGCTCCGTCTGACCTGGGTATTGACAAATCCATATTCATCAAGCCTAAAACATTTCACCTTACAGTACTCATGCTTAAGCTATGGAACAAAGAGCGAATTAAGACAGCCTCTGAGGTCTTGCAGAGTATCTCCTTGAAAGTTATGGAAGCCTTGGATAATCAGCCTCTCTCTATAAGATTAAAGGGACTGGGTTCTTTGGCAAAAGCCCGTGTTCTGTATGCTCCTGTGGAAGAGACTGGCGGTGAGGATCGTCTTTTACATGTCTGTCAAGTCATCATTGATGCATATGTTGAAGCTGGACTTGTATTAGAGAATGATGCTAAACAGAAATTGAAGCTACACGCCACTGTGATGAATGCAAGGCATAGGAAAAGAACAAGTGGACAAGAAAGGTCGATTCTTTTGATGCACGGGGCATATTCAAGCAGTATTGATCAGAGGACTGGGGGCAAAGCCTTTTGTGCTATATTTCTAACTCCCCCAACACTTCCTTATCTTATATCTTCTCCTCCTCCATCTTTGAGATTCTCAAAGAAACTTCTGAAGATGGCTGGCATAGCATTCGGAAGCTTCAATGATTCTGTCAGTTTTGCCTCCATCAAGGCCTACATTGCTGAGTTCATCTCAACCCTTCTCTTTGTTTTTGCCGGTGTTGGTTCAGCCATAGCCTATGCTAAGTTGACATCAGATGCAGCTCTTGATCCAACTGGGTTGGTAGCCGTTGCTATTTGCCATGGTTTTGCTCTCTTCGTTGCTGTTTCTGTTGGAGCCAACATTTCTGGTGGCCATGTGAACCCTGCTGTGACCTTTGGGTTGGCTCTTGGGGGCCACATCACCATCCTCACTGGTCTCTTCTACTGGATTGCACAGCTTCTCGGCTCCATAGTGGCATCCTTACTCCTCAAGTTTGTCACTGGCTATGATACTCCTATCCACAGTGTTGCTGCGGGAATTGGAGCTGGTGAAGGAGTAGTTACAGAGATCATAATCACATTTGGATTAGTGTACACAGTGTATGCCACAGCAGCAGACCCTAAGAAGGGTTCGTTGGGCACAATTGCACCCATTGCCATTGGTTTCATTGTTGGCGCCAACATCTTAGCAGCAGGGCCATTCTCTGGCGGGTCCATGAACCCTGCACGCTCCTTTGGCCCTGCTGTTGTCAGTGGTGACTTTCATGACAACTGGATTTACTGGGTTGGCCCTCTTATTGGTGGTGGTTTGGCTGGTCTTATCTATACCTATGCCTTCATCCCCACCAACCATGCACCTCTCGCTACTGAATTTTGA 2007 0.435 SLMKDALVKSVDGGKVQETGCSTSSNISNEHLTKVVADSATSSSQLQDNAENRVLEGDSSVSTEKHSISVGASLFRFIKGKGGSTQKKIEEDMGVKIIIPTSKEEDFLVTTEGISINSGNSASEKIQAIIDETVNSRSLDYSHFISLPLAIHPELVDKLINFQHSILEIGSCMDENTDTETDSNEDESTTTDTKKVDQLSKENSGVAVELKVNDNSKSVKVNVTNIPLVSYAPKASKSSAPSDLGIDKSIFIKPKTFHLTVLMLKLWNKERIKTASEVLQSISLKVMEALDNQPLSIRLKGLGSLAKARVLYAPVEETGGEDRLLHVCQVIIDAYVEAGLVLENDAKQKLKLHATVMNARHRKRTSGQERSILLMHGAYSSSIDQRTGGKAFCAIFLTPPTLPYLISSPPPSLRFSKKLLKMAGIAFGSFNDSVSFASIKAYIAEFISTLLFVFAGVGSAIAYAKLTSDAALDPTGLVAVAICHGFALFVAVSVGANISGGHVNPAVTFGLALGGHITILTGLFYWIAQLLGSIVASLLLKFVTGYDTPIHSVAAGIGAGEGVVTEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFHDNWIYWVGPLIGGGLAGLIYTYAFIPTNHAPLATEF 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03186 668 Gene3D Glycerol uptake facilitator protein. 423 665 IPR023271 -
Gma13g03186 668 ProSitePatterns MIP family signature. 502 510 IPR022357 -
Gma13g03186 668 Gene3D K Homology domain, type 1 52 138 IPR036612 GO:0003723
Gma13g03186 668 PANTHER MIP PROTEIN 422 668 - -
Gma13g03186 668 Pfam KH domain 67 127 IPR004088 GO:0003723
Gma13g03186 668 TIGRFAM MIP: MIP family channel proteins 444 652 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma13g03186 668 MobiDBLite consensus disorder prediction 175 198 - -
Gma13g03186 668 Pfam AKAP7 2'5' RNA ligase-like domain 141 370 IPR019510 -
Gma13g03186 668 MobiDBLite consensus disorder prediction 38 61 - -
Gma13g03186 668 CDD MIP 440 654 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma13g03186 668 MobiDBLite consensus disorder prediction 1 24 - -
Gma13g03186 668 Gene3D Cyclic phosphodiesterase 139 391 - -
Gma13g03186 668 SUPERFAMILY LigT-like 251 343 IPR009097 -
Gma13g03186 668 PANTHER AQUAPORIN-8 422 668 IPR034294 -
Gma13g03186 668 CDD vigilin_like_KH 67 113 - -
Gma13g03186 668 PRINTS Major intrinsic protein family signature 440 459 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma13g03186 668 PRINTS Major intrinsic protein family signature 484 508 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma13g03186 668 PRINTS Major intrinsic protein family signature 635 655 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma13g03186 668 PRINTS Major intrinsic protein family signature 521 540 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma13g03186 668 PRINTS Major intrinsic protein family signature 598 620 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma13g03186 668 PRINTS Major intrinsic protein family signature 565 583 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma13g03186 668 ProSiteProfiles Type-1 KH domain profile. 63 130 - -
Gma13g03186 668 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 66 135 IPR036612 GO:0003723
Gma13g03186 668 Pfam Major intrinsic protein 435 652 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma13g03186 668 SUPERFAMILY Aquaporin-like 436 663 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03186 Gma-Chr13 45990397 46002327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03186 422 667 Major Intrinsic Protein MIP AT3G16240 79.032 2.76e-132 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03186 K09873 K18666 gmx:100785531 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03186 13 45990397 46002327 Gma13g03186 13 45990397 46002327 ECH