Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03182 ATGGCATCCCGTTTGTTCGTCCTTTCTACTTGTGTGATCATTTTCATGGCTGCCACCAATACTTGTGTTGAAGCTTCCGTGCAATTCAAAGTTGGTGGTAGCTTCGGTTGGCATGAACCTGCAGGCACCAACAATACTGATCAACTTTATATTCAATGGGCTGAAAGGAACAGATTTCAAGTTGGTGATGCTCTTGTTTTTGAGTACCAGAATGACTCGGTTCTTAGTGTGGAGAAATTTGATTACATGAATTGCGATGCAAGTAATCCTATCACTGCCTTCGACAATGGGAAGAGCACGTTTAATCTTGACAGGCCAGGGAACTTCTACTTCATCAGTGGAACCGATGATCACTGCAAGAATGGCCAAAAACTACTTGTGGATGTGATGCACCCACATACTGTCCTTAAATCTCCACCACCCATTTCCCTTCCACCAGAAGGGTTTCCACCAATGGCTCCTCCACCTTCTGATGATCAAAGCCTAGAGGCTTCATCAGCCTCAGTGCTTCTTACTTTTATGTTTATGTCTCTTTTCGTCACATCTGTTAGTGTCATGCTGTTGGCATTCTGA 573 0.4398 MASRLFVLSTCVIIFMAATNTCVEASVQFKVGGSFGWHEPAGTNNTDQLYIQWAERNRFQVGDALVFEYQNDSVLSVEKFDYMNCDASNPITAFDNGKSTFNLDRPGNFYFISGTDDHCKNGQKLLVDVMHPHTVLKSPPPISLPPEGFPPMAPPPSDDQSLEASSASVLLTFMFMSLFVTSVSVMLLAF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03182 190 MobiDBLite consensus disorder prediction 140 157 - -
Gma13g03182 190 CDD OsENODL1_like 28 130 IPR041846 -
Gma13g03182 190 ProSiteProfiles Phytocyanin domain profile. 27 131 IPR003245 GO:0009055
Gma13g03182 190 PANTHER BLUE COPPER PROTEIN 11 178 IPR039391 GO:0009055
Gma13g03182 190 SUPERFAMILY Cupredoxins 26 130 IPR008972 -
Gma13g03182 190 MobiDBLite consensus disorder prediction 140 161 - -
Gma13g03182 190 Gene3D - 26 135 IPR008972 -
Gma13g03182 190 Pfam Plastocyanin-like domain 45 123 IPR003245 GO:0009055
Gma13g03182 190 PANTHER EARLY NODULIN-LIKE PROTEIN 2 11 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03182 Gma-Chr13 45959359 45960215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03182 9 150 Phytocyanin Superfamily AT1G79800 47.297 1.15e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03182 - - gmx:100783893 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03182 13 45959359 45960215 Gma13g03182 13 45959359 45960215 ECH
Gma13g03182 13 45959359 45960215 Gma15g00183 15 1455500 1456373 GST