Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03170 ATGGTGGTAATAGAGCAGGAGGAGAGTGAGCATCCAAACGCCAACCCTTTCAATGCCAGCAACGACCCAACCGACGGCTTCCAAACTGCAGTTGACGCCGATCTCGGCAGTGACGGCGAAGGCAGCGGATCCTACTGTCGGGAAGAACAGAATCACGCCGAGAAACAGCAGCAGACGGAGCAAGAGCCAGAACACGTTGTTCCTCGGAGCACCGAATCATCCGAGAATAATGCCAAGATCAATGAAGAAGAATCGAGATTGAAAGCATTGGATCAAGCAAATGATGCAAAGGTAGAAGGGAACAAGCTTTTTGGAGATGGGAAGTATGAAGAGCCGTTATCGCAATATGAACTTGCTTTACAAGTAGCACCAAACATGCCTTCATCTGTCAAAATACGTTCAATATGCCATTCAAACAGTGGTGTGTGCTTTCTGAAACTGGGAAAATATGATAACACAAATAAAGAATGCACAAAAGCATTAGAACTGAACCCTGTGTACGTTAAAGCTTTGGTAAGAAGAGGAGAAGCTCATGAAAGCTTGAGCATTTTGAAGAGGCCATTGCTGttggcagatatgaaaaagatcttagaaattgttccctcaaatgatcaagctaggaaaaccattcggcgactagagcccctttctgcagaaaaaacgagaaaagatgaaggaggaaatgCAAAACTGAAAGAAATGGGCAATTCTGTCCTGGGTCGCTTTGGGATGAGTGTAGACAACTTTAAATCAGTCAAAGATCCAAACACTGCAAGAAAGAGGTGGTATAAAGTGATACAGGTAATGTTGGAATTCTGA 819 0.381 MVVIEQEESEHPNANPFNASNDPTDGFQTAVDADLGSDGEGSGSYCREEQNHAEKQQQTEQEPEHVVPRSTESSENNAKINEEESRLKALDQANDAKVEGNKLFGDGKYEEPLSQYELALQVAPNMPSSVKIRSICHSNSGVCFLKLGKYDNTNKECTKALELNPVYVKALVRRGEAHESLSILKRPLLLADMKKILEIVPSNDQARKTIRRLEPLSAEKTRKDEGGNAKLKEMGNSVLGRFGMSVDNFKSVKDPNTARKRWYKVIQVMLEF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03170 272 MobiDBLite consensus disorder prediction 1 80 - -
Gma13g03170 272 MobiDBLite consensus disorder prediction 45 69 - -
Gma13g03170 272 Gene3D Tetratricopeptide repeat domain 49 234 IPR011990 GO:0005515
Gma13g03170 272 MobiDBLite consensus disorder prediction 11 27 - -
Gma13g03170 272 SUPERFAMILY TPR-like 91 211 IPR011990 GO:0005515
Gma13g03170 272 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 47 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03170 Gma-Chr13 45825392 45835203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03170 52 224 Calmodulin-binding Proteins AT3G25230 31.937 3.69e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03170 K24926 - gmx:100808386 360.533