Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03166 ATGGGCAAAGCTACAAGGTGGTTGAAGGGGTTGTTGGGAAAGAAGAAAGAGAAGGATTACTGTGGCTATTCAGGCTCATTGGATCTTGACAAGAGGGAAAAGAAACGATCGGAGAAGGATGAAGTGAGTCACTTTACTCCAACCAGTGTTACCACCTTTGACCGTACTAGGTTCAGATCCTTTGTTGCCCAAAAAGAGAATGTGAAGAACAAGCACTCCATTGATGTGGCTGTTGTGAGATCAAAAAGCTGTGACAGAGGCACCTTGCTTATTGGAAGCATGCAGGGCTGGGCTGCTGTGTTGATTCAATCCTTTTTTAGAGGTTATTTGGCGCGTAAGGCTCTTAGAGCACTCAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGGTATCTAGTTCGAAAAAGGGTTGCAGCAACTCTTCACAGTGTGCAAGCTATGATCAGAGCTCAAGCTGTAGCTCGATCCGCGCGAGCTCGTCGTTCCATGGACAAGGAGAATAGATTTCATCCTCAAACTCCTTCCAGAAAACACGTGCAACGGTTTGATGAAGCAAGAAATTATCAATTACCCAATAGAAGGGTACCTATATGCTGTAAGGCACCCTTTAATAGATTTGATGGGAGTCAAAAAGTTGTTGAGGTTGACACTCACATGCCACATTCAAGAAGTAGGAGCATTAACACTGCAATGTCAGAATGTGGAGAAGACTTGAACTATGAAGCAATGTCATCCTCTCTTGGTTGTCCAGTTCAAGGTCGAATCTCACTTCATGAGAGGCAACACCCTCAAGAGTTTGAATGGCTCTTCAACGTTGATGAAGGTAATAACAAGTTCTCCACAACACACAACACGCCTCGTTTACAAAAATGTATGCTACCAGGTACTCCAGTGAAGAGTGTTTGTGGAGAAACCTTCTTCAGGAATTGCTCCAATTTCCCTAACTACATGGCTAATACTCACTCTTCTAAGGCCAAACTAAGGTCTCACAGTGCTCCAAAGCAAAGGCCTGAACTCAAGAAAAGGCTTTCAATCAATGAAATGATGGCAGCAAGAAATAGTGTTAGTGGTGTGGGAATGCAGTGGTCATCATCCAACCCGAAAACTCAAGAAGATTACTTTTTTTTTGAAAGGGTTATTTAG 1143 0.4313 MGKATRWLKGLLGKKKEKDYCGYSGSLDLDKREKKRSEKDEVSHFTPTSVTTFDRTRFRSFVAQKENVKNKHSIDVAVVRSKSCDRGTLLIGSMQGWAAVLIQSFFRGYLARKALRALKGLVKIQALVRGYLVRKRVAATLHSVQAMIRAQAVARSARARRSMDKENRFHPQTPSRKHVQRFDEARNYQLPNRRVPICCKAPFNRFDGSQKVVEVDTHMPHSRSRSINTAMSECGEDLNYEAMSSSLGCPVQGRISLHERQHPQEFEWLFNVDEGNNKFSTTHNTPRLQKCMLPGTPVKSVCGETFFRNCSNFPNYMANTHSSKAKLRSHSAPKQRPELKKRLSINEMMAARNSVSGVGMQWSSSNPKTQEDYFFFERVI 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03166 380 ProSiteProfiles IQ motif profile. 98 123 IPR000048 GO:0005515
Gma13g03166 380 Pfam Protein of unknown function (DUF4005) 280 356 IPR025064 -
Gma13g03166 380 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 380 - -
Gma13g03166 380 Pfam IQ calmodulin-binding motif 122 136 IPR000048 GO:0005515
Gma13g03166 380 Pfam IQ calmodulin-binding motif 97 116 IPR000048 GO:0005515
Gma13g03166 380 Gene3D - 55 120 - -
Gma13g03166 380 Gene3D - 121 169 - -
Gma13g03166 380 ProSiteProfiles IQ motif profile. 119 146 IPR000048 GO:0005515
Gma13g03166 380 SMART iq_5 117 138 IPR000048 GO:0005515
Gma13g03166 380 SMART iq_5 94 116 IPR000048 GO:0005515
Gma13g03166 380 PANTHER IQ-DOMAIN 5-RELATED 1 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03166 Gma-Chr13 45782604 45784257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03166 1 360 IQD Protein Family AT3G16490 40.447 2.39e-74 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03166 - - gmx:100797296 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03166 13 45782604 45784257 Gma13g03166 13 45782604 45784257 ECH
Gma13g03166 13 45782604 45784257 Gma15g00199 15 1626806 1628463 GST
Gma13g03166 13 45782604 45784257 Gma07g00142 07 1192929 1194851 PCT
Gma13g03166 13 45782604 45784257 Gma08g01838 08 16495056 16496852 PCT
Gma07g00142 07 1192929 1194851 Gma13g03166 13 45782604 45784257 PCT
Gma08g01838 08 16495056 16496852 Gma13g03166 13 45782604 45784257 PCT