Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03154 ATGTCGACCGTACCAGGACAGCTCATCTGGGAGATCGTGAAGAAGAACAACTCCTTTTTGGTGAAAGAGTTCGGAAGGGGCACTCAGAGCGTGCAGTTCAGCAGAGAGCCCAACAATCTCTACAACCTCAACACTTTCAAGTACTCCGGTTTGGCGAACCAGAAAACTGTCACTGTTCAACCTGCTGGTAAAGACCAGTCCGTGTTGCTCGCAACAACCAAGACAAAGAAGCAAAACAAGCCTGCTGCTTTGCTTCACAAATCTGTCATGAAAAAGGAGTTCCGTAGGATGGCAAAGGCTGTGCAAAATCAGGTAGCAGATAACTACTACAGGCCTGATCTCAAAAGGGCAGCTCTGGCAAGATTGAGCGCTGTCAATAGGAGCCTCAGAGTAGCTAAGTCTGGTGTGAAGAAGAGGAACAGACAGGCTGTGAAGGTCCCCAGCAGGAAGTGA 453 0.4901 MSTVPGQLIWEIVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANQKTVTVQPAGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKRAALARLSAVNRSLRVAKSGVKKRNRQAVKVPSRK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03154 150 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 150 - -
Gma13g03154 150 Gene3D - 6 133 - -
Gma13g03154 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Gma13g03154 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03154 Gma-Chr13 45672244 45675815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03154 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 72.028 8.28e-76 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03154 K02903 - gmx:100499963 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03154 13 45672244 45675815 Gma15g00213 15 1829543 1831968 ECH
Gma13g03154 13 45672244 45675815 Gma13g03154 13 45672244 45675815 ECH
Gma13g03154 13 45672244 45675815 Gma15g00213 15 1829543 1831968 GST
Gma13g03154 13 45672244 45675815 Gma07g00120 07 1023810 1025525 PCT
Gma13g03154 13 45672244 45675815 Gma08g01814 08 16180449 16182603 PCT
Gma07g00120 07 1023810 1025525 Gma13g03154 13 45672244 45675815 PCT
Gma08g01814 08 16180449 16182603 Gma13g03154 13 45672244 45675815 PCT