Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma13g03148 | ATGGAGGAAAAACCTAAGCTCCTCTTCCATGGAACAATTCAAGCTACCATCTTCAATGCCACACCTTACTCACCTTCGTTTCCCTTCAATTGTGTATGTACAAATGGAAAGCCTGCTTATGTGACCATCAACATAGATAACAAGAAGGTGGCGAAAACGACTCAAGAACGTGAATGTTTGTGGAACCAAACCTTTCAGATTCAGTGTGCTCATCCAGAAGACTCAACAATCACAATTACACTGAAATCATCATGCTCCATTTTGGGGAGATTTCACATGCAGGCCAAGCGGTAG | 294 | 0.4252 | MEEKPKLLFHGTIQATIFNATPYSPSFPFNCVCTNGKPAYVTINIDNKKVAKTTQERECLWNQTFQIQCAHPEDSTITITLKSSCSILGRFHMQAKR | 97 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma13g03148 | 97 | PANTHER | PHOSPHOLIPASE D ALPHA 4 | 6 | 97 | - | - | |
| Gma13g03148 | 97 | PANTHER | PHOSPHOLIPASE D | 6 | 97 | IPR015679 | - | |
| Gma13g03148 | 97 | Pfam | C2 domain | 39 | 87 | IPR000008 | - | |
| Gma13g03148 | 97 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 9 | 87 | IPR035892 | - | |
| Gma13g03148 | 97 | CDD | C2 | 35 | 82 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma13g03148 | Gma-Chr13 | 45600492 | 45600915 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gma13g03148 | 31 | 97 | Phospholipase D Gene Family (Wang group) | AT1G55180 | 63.235 | 3.67e-23 | 90.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma13g03148 | K01115 | - | gmx:100807431 | 186.422 |