Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03138 ATGGAATTGCAGCTTATTTTCCTGCTAATTAAGCTACATTTTGTTATATGTATTCCTCAGCTTCATGAATATGCTGCCACGTATCTGCACCATTCGAGAATCAGCAGCCATTCAAGTATTGCATTCCCACCATCAGAATCACCTTCTGGAGTTCCCGATAGTATTGCACTTCCACCTTCCAAGGCATCTTCTAGCATTCCCAGAAGTATTGCACTCTCACCTTCCAAATCATTCCCCAAAATGAAATGGACGCACAGTTCTATGGACTATCCAATATCACACCATAAGCATCACCATTCCAGAATAAAGTCCATCAACCAAGTTCCTGCACCAACCTATCCAATCCGCCCTCATACTCGTCAAGGTTCTCCAGTCTTCAAATCACAACATCCATCCTCTTCACCTATGAGCTGGAATTTAAATGCAGCAGCACCAGCACCTGCACCATCAACAACAGCTCTACCACACCACTTGAATGTGCCCTCTCCTTCACCTAGAATTTCACCTTCAGGTTCATCATTGAAGAAGAAAAAGACTCCACCACCAGCATATACTTTGGTTCTACCATCTCCACCGCCTAACAAAGATTGTATGTCGGTGACTTGCTCTGAACCCTTGACATATACACCTCCTGGATCAGCTTGTGGTTGTGTATGGCCACTTCAAGTTAAACTTCGCATCAGCATTGCAATATACAAGTTTTTTCCTTTGGTTTCCAAGCTTGCCAAAGAAATTGCAGCTACTGTTTTGCTGAACCGTAATCAAGTACGCATTGTGGGAGCTGATGCAACTAGCCAGCAGCTAGAGAAAACCACTATTCTCATAAACTTGGTACCTCAAGGAGTGATGTTTGATGATACAACGGCATTTTTAATATATAAGAAATTCTGGCAGAGAGAGATTCTCAATGATGCTTCTGCCTTTGGGGACTATGAAGTGCTCTATGTTCATTATCCAGGCCTTCCACCATCTCCACCTTCAAATGTTCATGGTATAGATGTTGAACCATACCCTGGTCGCGGCAACAATGGAACAATAGTGAAACCTTTGGGAGTAGATATCTCAGGGAAGAAAAAAGAAGGGGGTGGTGGAAGAATGGTTATTATGATCGTGCTGTCATCTTTTACTGCCTTTGTTCTATTCATTGGAGTAGCCTGGCTTTGTCTCTTGAAATGTGACTCCTGCACTCTCGAACCTGAACAAATTCCAGATGTCAAAATTCAATCCTCTTCAAAGCGATCAGCAGGGACTGCCAGTGCTAGGTCATTGACTTATGGGAGCATGCCAGGTTCTAGATCAATGTCCTTCAGTTCAGGAACAATAATATACACAGGATCAGCTAAAATATTTACTTTGaatgaaatagagaaagcaacaaataacttcaattcttcaagaatattaggagaaggtggcttcggtcttgtttataaaggtgacctagatgatggcagggatgtggcagtgaagattctcaaaagagaggaccagcatggtgaccgtgaattctttgtagaagctgagatgcttagtcgcttgcaccatagaaatttagttaaaTTGATAGGTTTATGCACAGAGAAACAGACTCGCTGCTTAGTCTACGAGCTCGTCCCTAATGGCAGCGTGGAATCCCACTTACATGGTGCTGACAAGGAAACCGAACCACTTGATTGGGATGCACGGAtgaagattgcacttggtgcagctaggggattggcttatctgcatgaagattgtaatccatgtgtcatacatagggacttcaaatccagcaacattttattggaacacgattttacacccaaagtttcagattttggattggctagAACAGCACTGAACGAGGGAAACAAGCACATCTCAACACATGTTATTGGAACATTTGGctatgtagctcctgaatatgcaatgactggtcatctccttgtgaaaagtgatgtttacagctatggagttgtactccttgagctcctaagtggaagaaagcctgtggatttgtcacagCCAGCAGGTCAAGAAAACCTTGTTGCTTGGGCTCGTCCACTTCTTACAAGTAAGGAGGGTTTGCAGAAGATCATAGACTCAGTTATAAAGCCCTGTGTTTCTGTCGATAGCATGGTAAAAGTTGCAGCAATTGCATCCATGTGTGTGCAACCAGAAGTCACTCAACGTCCTTTCATGGGTGAAGTTGTTCAGGCGTTGAAGCTGaaattcatggatgccctcctgTCGCTCTGGGTTGATTGCCCTTGTGTTTTCGGTTCAGTTCCCCGGTTCTTGTCTCTCTTGGTTCTGCCGCTGCCATCGAATTGA 2316 0.3476 MELQLIFLLIKLHFVICIPQLHEYAATYLHHSRISSHSSIAFPPSESPSGVPDSIALPPSKASSSIPRSIALSPSKSFPKMKWTHSSMDYPISHHKHHHSRIKSINQVPAPTYPIRPHTRQGSPVFKSQHPSSSPMSWNLNAAAPAPAPSTTALPHHLNVPSPSPRISPSGSSLKKKKTPPPAYTLVLPSPPPNKDCMSVTCSEPLTYTPPGSACGCVWPLQVKLRISIAIYKFFPLVSKLAKEIAATVLLNRNQVRIVGADATSQQLEKTTILINLVPQGVMFDDTTAFLIYKKFWQREILNDASAFGDYEVLYVHYPGLPPSPPSNVHGIDVEPYPGRGNNGTIVKPLGVDISGKKKEGGGGRMVIMIVLSSFTAFVLFIGVAWLCLLKCDSCTLEPEQIPDVKIQSSSKRSAGTASARSLTYGSMPGSRSMSFSSGTIIYTGSAKIFTLNEIEKATNNFNSSRILGEGGFGLVYKGDLDDGRDVAVKILKREDQHGDREFFVEAEMLSRLHHRNLVKLIGLCTEKQTRCLVYELVPNGSVESHLHGADKETEPLDWDARMKIALGAARGLAYLHEDCNPCVIHRDFKSSNILLEHDFTPKVSDFGLARTALNEGNKHISTHVIGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDLSQPAGQENLVAWARPLLTSKEGLQKIIDSVIKPCVSVDSMVKVAAIASMCVQPEVTQRPFMGEVVQALKLKFMDALLSLWVDCPCVFGSVPRFLSLLVLPLPSN 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03138 771 PANTHER OS01G0750732 PROTEIN 7 737 - -
Gma13g03138 771 SUPERFAMILY Protein kinase-like (PK-like) 441 736 IPR011009 -
Gma13g03138 771 ProSitePatterns Protein kinases ATP-binding region signature. 468 490 IPR017441 GO:0005524
Gma13g03138 771 MobiDBLite consensus disorder prediction 39 73 - -
Gma13g03138 771 MobiDBLite consensus disorder prediction 122 146 - -
Gma13g03138 771 MobiDBLite consensus disorder prediction 58 72 - -
Gma13g03138 771 CDD STKc_IRAK 468 736 - -
Gma13g03138 771 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
Gma13g03138 771 MobiDBLite consensus disorder prediction 155 175 - -
Gma13g03138 771 Pfam Protein tyrosine and serine/threonine kinase 465 735 IPR001245 GO:0004672|GO:0006468
Gma13g03138 771 Gene3D Transferase(Phosphotransferase) domain 1 538 743 - -
Gma13g03138 771 Gene3D Phosphorylase Kinase; domain 1 435 537 - -
Gma13g03138 771 PANTHER OS01G0750732 PROTEIN 7 737 - -
Gma13g03138 771 ProSiteProfiles Protein kinase domain profile. 462 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g03138 771 MobiDBLite consensus disorder prediction 110 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03138 Gma-Chr13 45524777 45530172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03138 97 737 Receptor kinase-like Gene Family AT5G56890 57.271 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gma13g03138 PK_Tyr_Ser-Thr 5.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03138 - - gmx:100775318 1433.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03138 13 45524777 45530172 Gma15g00228 15 2003861 2010424 GST
Gma13g03138 13 45524777 45530172 Gma07g00091 07 750033 755290 PCT
Gma13g03138 13 45524777 45530172 Gma08g01781 08 15850734 15856379 PCT
Gma07g00091 07 750033 755290 Gma13g03138 13 45524777 45530172 PCT
Gma08g01781 08 15850734 15856379 Gma13g03138 13 45524777 45530172 PCT