Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03136 ATGCATGCAGGAGAAGTCACGACAGCACTTTGTTTTCCTGCAACCCTCAACAAGAAAACCGCTTTAAACCTAAACCACACACTTTCTTCTCCATTTATTAATTCCTCCACTTCACTCCATGCATGCACCATATTCTTGAACCTCACACACATGTACAGTAGCATGGCTGCAACCAACGAAGCAGAAGAAGCAGCAGGAGGCAAAAGGGTCCAATACCCACTGGACTCTTCCTCCTACAAGCTCCTGAACGAGATCGGCGAAGGCGTGAGCGCCGTCGTCTACAAAGCCCTCTGCATCCCCATGAACTCCGCCGCCGTCGCAATCAAATCCATCGACCTCGACCGCTCCCGGCCCGACTTAGACGACGTCCGTCGCGAGGCCAAAACCCTATCCCTCCTTTCCCACCCCAACATCCTCAAAGCACACTGTTCCTTCACCGTGGACCGCCGCCTCTGGGTGGTGATGCCGTTCATGGCCGCAGGATCACTTCAATCCATCATTTCTCATTCCCACCCCAACGGCTTAACGGAGCCCTGCATCGCCGTGGTTCTCAGAGACACGCTCAACGCACTCTCCTACCTCCACGGCCAGGGCCATCTCCACAGAGACATTAAAGCCGGTAACATCCTCGTAGACACCAATGGGCAAGTGAAGCTCGCTGATTTCGGTGTCTCCGCTTCCATATACGAGTCCACCACCACCACGTCTTCTTCTTCGTCTCTCAAGTTCACCGATGTTGCCGGCACGCCCTATTGGATGGCTCCTGAGGTGATTCACTCACACACGGGTTACAGTTTCAAGGCTGATATATGGTCCTTTGGGATAACCGCGTTGGAACTTGCGCATGGAAGGCCTCCCCTCTCGCACCTTCCACCTTCCAAGTCCATGATGCTCAAGATCACCAAGAGGTTTCGTTTCTCCGATGATTTCGATGACAAGTATAGGAAGGGGAATGGGAAGAAGTTCTCTAAGGCGTTCAAGGACATGGTGGCTTCTTGTCTCGACCAAGATCCTTCCAAGAGACCTACTGCTGATAAGTTGCTCAAACACCCTTTCTTTAAGAACTGTAAGGGAACCGATTTTCTGGTGAAGAATGTGCTGCAAGGGTTGCCCAGTGTGGAGAAAAGGTACAGGGAGAGCAAGGGTAATTTGcatgaagatgatgatgatggtgatgatgatgatgatgatccctccaTGCAGGTGAAGCAGAGAAGGATAAGTGGGTGGAACTTCAATCAAGACGGCTTGGAGCTTGACCCTGTGTTTCCAAACGATGTTAAAGAGGTTCGGTTTGGAGGAGAAACGGTTATCCAACAAGCTGCAGGAATGGAAAAAGTGAACAACAACAGTAGCAGTAGGGAAGGGATGTTGGCGACTCTGAATGTATTGAAAGGGAGCCTGGAGCAAGAGCTGTGGCAAGTGAAGTTTCTGGTGAATACGATACAAGGAGATCATCACGACACTCAAGTTCCTGAGGAGCAGGAGATTTCTAGGCTGAGGGCTCAATTGGAAAATGAGAGGATGAAGAACTTGCAGTTGGAGTTGCAGCTTCAGACCTCCAAGCTCCACCAGAAATCTGATTCCAACTAA 1593 0.4934 MHAGEVTTALCFPATLNKKTALNLNHTLSSPFINSSTSLHACTIFLNLTHMYSSMAATNEAEEAAGGKRVQYPLDSSSYKLLNEIGEGVSAVVYKALCIPMNSAAVAIKSIDLDRSRPDLDDVRREAKTLSLLSHPNILKAHCSFTVDRRLWVVMPFMAAGSLQSIISHSHPNGLTEPCIAVVLRDTLNALSYLHGQGHLHRDIKAGNILVDTNGQVKLADFGVSASIYESTTTTSSSSSLKFTDVAGTPYWMAPEVIHSHTGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMMLKITKRFRFSDDFDDKYRKGNGKKFSKAFKDMVASCLDQDPSKRPTADKLLKHPFFKNCKGTDFLVKNVLQGLPSVEKRYRESKGNLHEDDDDGDDDDDDPSMQVKQRRISGWNFNQDGLELDPVFPNDVKEVRFGGETVIQQAAGMEKVNNNSSSREGMLATLNVLKGSLEQELWQVKFLVNTIQGDHHDTQVPEEQEISRLRAQLENERMKNLQLELQLQTSKLHQKSDSN 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03136 530 SUPERFAMILY Protein kinase-like (PK-like) 73 357 IPR011009 -
Gma13g03136 530 Gene3D Phosphorylase Kinase; domain 1 67 157 - -
Gma13g03136 530 Gene3D Transferase(Phosphotransferase) domain 1 161 400 - -
Gma13g03136 530 Coils Coil 497 522 - -
Gma13g03136 530 ProSitePatterns Protein kinases ATP-binding region signature. 85 109 IPR017441 GO:0005524
Gma13g03136 530 ProSiteProfiles Protein kinase domain profile. 79 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g03136 530 Pfam Protein kinase domain 79 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g03136 530 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 63 524 - -
Gma13g03136 530 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 63 524 - -
Gma13g03136 530 SMART serkin_6 79 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g03136 530 MobiDBLite consensus disorder prediction 377 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03136 Gma-Chr13 45512777 45514516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03136 69 513 MAP Kinase Kinase Kinase Kinase AT4G14480 56.303 0.0 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gma13g03136 Pkinase 8.2e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03136 K08835 - gmx:100820227 1023.46