Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03135 ATGTCAAGGAGCAGCACACAGGCATGTGCAGCTTGTAAGTACCAACGCAGGAAGTGCGGGTCCAACTGCATTCTCGCACCTTATTTTCCTCATGATCGCCAAAAACAGTTCCTTAATGCCCATCGTTTATTCGGGGTTGGCAAGATCACTAACATGCTTAAGCCCCTCGATCAGCATCACAGAGACTTAGCCATGAGCACCGTTATCTACGAATCCGACATGCGCGCCCGTGACCCCATTGGCGGTTGCTACAGGCTCGTCCTCCAATTGCAATCTCAGATCGATTACGCCACCCAAGAACTTCATCTTCTTCTTCAACACCTTGCTTTCTTCAAATCACACCCTCCTAATTCTAATTCTCCTGACATCATCAATAATGTCACTCCTCAGCCTCCTTACCCCCTTGAACAACAAATTCCACAGGAGCATCAACAGCAGCAACAACAACAATGCTTTAACTATAATCTTTTGCAAGATGATATCAATATGTGGACCATTCAGAACGCTGTACCTCCTTTGTCACCCTTGTCCTTAGAGAATGACATCAATCAAGATCAAGATCCTGTTGTTGATTATGGATACGATCAAAAGCCTGGTGTTCTTGATCTGATGGATAAAATAAAATCAGATGATTCAAGTGCCCAATATTAA 651 0.4424 MSRSSTQACAACKYQRRKCGSNCILAPYFPHDRQKQFLNAHRLFGVGKITNMLKPLDQHHRDLAMSTVIYESDMRARDPIGGCYRLVLQLQSQIDYATQELHLLLQHLAFFKSHPPNSNSPDIINNVTPQPPYPLEQQIPQEHQQQQQQQCFNYNLLQDDINMWTIQNAVPPLSPLSLENDINQDQDPVVDYGYDQKPGVLDLMDKIKSDDSSAQY 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03135 216 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 213 - -
Gma13g03135 216 Pfam Lateral organ boundaries (LOB) domain 8 103 IPR004883 -
Gma13g03135 216 PANTHER LOB DOMAIN PROTEIN 3 213 - -
Gma13g03135 216 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03135 Gma-Chr13 45509148 45509798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03135 7 167 AS2 family AT3G13850 45.000 6.14e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma13g03135 LOB 2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03135 - - gmx:102668887 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03135 13 45509148 45509798 Gma07g00087 07 719931 721979 PCT
Gma13g03135 13 45509148 45509798 Gma08g01778 08 15812287 15813437 PCT
Gma07g00087 07 719931 721979 Gma13g03135 13 45509148 45509798 PCT
Gma08g01778 08 15812287 15813437 Gma13g03135 13 45509148 45509798 PCT