Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03123 ATGAGCCGTGGCGTTGTGAGGAGGGGTCAAATTGGAGCGTGCGTGGGAAATAAACAAAGAAAAAGTGCTTCACAGCAGAAGCTACCTCTCCTCTTACTCGCTCCGTTTGCTCAGCAAAACGGTTTCTTTTCTCCAATGGGTGCTTCGGGAAGGTGGTTTAAGTCACTTCTTCCTTTTAGAAAGACCTCAACTGATCAAGAGAAGGGTGGTGACAACAAGAGTAAGAAGAAGTGGAAGCTATGGAGGGCATCTTCAGAAGGGTCCATGAAGAATGTTGGTGGTGGTGGTGCTGCTGCTGCATCTGATTCTTCCCTTACTTATGCGGTGGCTGTGATGGTTCCCAAAGATTTCAAGCTCATCAAGCAGGAATGGGCTGCCATCCGCATTCAGGCGGTGTTTCGAGCCTTCTTGGCTAGACGAGCTTTGAGGGCCTTGAGGGCAGTAGTAAGGCTACAAGCTATTTTTAGAGGCCGGCTAGTCAGGAAGCAAGCAGCTGTTACTCTGAGGTGCATGCAGGCTCTTGTTCGAGTTCAAGCACGTGTGAGGGCAAGGAATGTGAGGAATTCTCCTGAAGGGAAAGCTGTGCAGAAATTACTGGATGAGCATCACAACCACGCTGATCCTTTTAATCTAATTGAGCAAGGATGGTGTGACATTCCTGGAACTATGGATGAAGTTAAAGCAAAGCTACGAATGAGGCAAGAAGGAGCCATCAAGAGGGATAGAGCAATGGCATACTCTCTCTCCACTCAGTCAAGACTGTGTGCTAGTCCAAACCCAAAAGCCACTAAGGCATTGACTCCTGTCAAGCATAACAACCCAAGCAACAAGAGCTTAGGATATAGCTTGTTGGAACGCTGGATGGAGGCCAAGCCATGGGAGAGTCCAATCTCTAGGAAGAGTGAAGACCTTGTTCCTGCTTTTCAATCAAGAAGGAATGGTATGACAACTAGGATTTCAGTTAAGCCTATTATAACCAGTCAATCGACTTCATCATCTTCGGCCATGAGCTCTGAGTACATGTGTGATGATAATAGCCCTGTGTCAACATCTTATACCTCTGGATCTCTATCCTTGCCATCCACCAACACTGTTTTGGTGGAAGCAACAGAGGAAAGAGATGTTCATCAGCCAAGCTACATGAATTTGACAGAATCAACTAAGGCTAAACTTAAAGCCTGCAGGAGTTCTTCACAGAATTCAAAGAGACTTGTAATGGAGGACACAGTGTCTCACAATCACAGCACAACAACAGGCCTTATGAATGGAGATACTAGAAGCAGTTTTGATTCTGATCCTTCAGTTAACTTGTGGAAGGATTCTTGTGCGACACCTCTAAGGGCAAGTTATCAAAAACGACAAATTAGGATATGA 1374 0.4585 MSRGVVRRGQIGACVGNKQRKSASQQKLPLLLLAPFAQQNGFFSPMGASGRWFKSLLPFRKTSTDQEKGGDNKSKKKWKLWRASSEGSMKNVGGGGAAAASDSSLTYAVAVMVPKDFKLIKQEWAAIRIQAVFRAFLARRALRALRAVVRLQAIFRGRLVRKQAAVTLRCMQALVRVQARVRARNVRNSPEGKAVQKLLDEHHNHADPFNLIEQGWCDIPGTMDEVKAKLRMRQEGAIKRDRAMAYSLSTQSRLCASPNPKATKALTPVKHNNPSNKSLGYSLLERWMEAKPWESPISRKSEDLVPAFQSRRNGMTTRISVKPIITSQSTSSSSAMSSEYMCDDNSPVSTSYTSGSLSLPSTNTVLVEATEERDVHQPSYMNLTESTKAKLKACRSSSQNSKRLVMEDTVSHNHSTTTGLMNGDTRSSFDSDPSVNLWKDSCATPLRASYQKRQIRI 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03123 457 ProSiteProfiles IQ motif profile. 146 173 IPR000048 GO:0005515
Gma13g03123 457 SMART iq_5 121 143 IPR000048 GO:0005515
Gma13g03123 457 SMART iq_5 144 165 IPR000048 GO:0005515
Gma13g03123 457 Gene3D - 121 173 - -
Gma13g03123 457 ProSiteProfiles IQ motif profile. 122 150 IPR000048 GO:0005515
Gma13g03123 457 Pfam IQ calmodulin-binding motif 124 143 IPR000048 GO:0005515
Gma13g03123 457 Pfam IQ calmodulin-binding motif 146 163 IPR000048 GO:0005515
Gma13g03123 457 PANTHER IQ-DOMAIN 5-RELATED 46 453 - -
Gma13g03123 457 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 46 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03123 Gma-Chr13 45426174 45428494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03123 46 440 IQD Protein Family AT1G72670 44.731 3.21e-89 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03123 - - gmx:100816492 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03123 13 45426174 45428494 Gma15g00242 15 2105047 2107502 GST
Gma13g03123 13 45426174 45428494 Gma07g00076 07 623928 626771 PCT
Gma13g03123 13 45426174 45428494 Gma08g01765 08 15705354 15707706 PCT