Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03120 ATGGACCCCCGCAAAGAGAGAATAAAGAATGGGTGCCTGAAGATTTTGGAAGGAATAAATTCAATGTCTTTGGTAAATTTAGATGACCAGCAAGTCCATTCCTTAGTGATGATGAGAGAAATAGCACGTGGGGTTGTTGATGATCGAGATAGAAAGGTTACTAAAAGTGATGTGATCACTGCATTGCGCCACAGCATTGAGAAAATGGTGTGTGCATCCAGGGATATCATTCAAATATTAAGTAGGATGTCCTTTGAAGGCTTGGATGACCAGAGCATGCATTTAGTCATGAGGATGAAAGAAATTGCAAATGGGGTTATTGATAAGCAACCTAGAGTTGCAATAACTAGGCCTGACTTACTTGCTGAACAAGTTGGATTTGTGGATGAAGGGATGAGAGATAGTCCCGTGGTTGAGTCAACCAAGATCAGCAATGGGTATGTTCCGATTGGCGGGGCACAGAGCATGACTAATGAAGATGAGATGTTGGATGTGGAACATGTTTTAAGATTTGAAAATGGGATAGATGAAGTTCACGAGTCTTTGTTACCTTGTTTTCAGCAGTTTCTTCTGTGGCCACCTGATGATTGTGTCACCTTAGAGTGGGTTCAGGACATGATGGTCATCCTTGAGCAGGCTTCACAGAAGATGTTGCCATCTGAATTCTGTCATATTGTGCCGGCCATTTTGGTGGACAAATTGGCAGATGCTGCTTGCAGTATTTTATGTAAAGAACCAAACTGTGTGGAGATTAATTGTCAAGGAGAAGATTCAAAAGTAATTGTAGTAGGCGATGTACATGGGCAGTTTCATGATTTAATGTTTCTTTTCAAGCATGCAGGGGTTCCCTCTGAGAACCGGATTTATGTTTTTAATGGAAATTATGTAGATAAGGGAGCTTGGGGAATTGAAGTATTTTTGTTCTTGCTGGCTTGGAAGGTCTTGATGCCTCATAGAGTATATCTACTTCGTGGGAATCATGAATCAAGATATTGCACTGCAAGATATGGTTTTAAGAAGGAGGTGTGGGCCAAATATGGTGATCAAGGTGAAGATGTCTACAATAAATTCCTAGCATGTTTTAAGGAGCTTCCATTAGCTTCAGTTATTGCCAATTGTGTTTATACTACTCATGGAGGACTTTTCCGTAGTATACACGCAGCCCCTTCACAGAAACCGAAACGAAATAAAACACACAGGGTGGATCTCGGCTCTTTAGCTGAGTTATCTGAAGTTAAAAGATCTTTTGTAGATTGCCCTTATGAAGGTCCTAATATATTATTGAGTGATGTTCTCTGGTCAAGACCATCTAACAGGGATGGTCTGAGGGATAATACAGGTCAAAAGTTAGGTTTATTGTGGGGTCCTGATTGCACTGAGGCATTCTTAAAGCAGTACAATTTAAAGCTGATTATCAGATCACATGAAGGACCAGACGCAAGGGCTGGTAGAGATGATGATTTCGGGGACATGCTAAGTGGATACAGCATAGATCATGATGGAGAATCGGGAAGACTGTATACTCTTTTTAGTGCTCCAGACTATCCACAGTTTGGTAAAAGGAGATATAACAATAAGGGGGCATATGCAGTATTGAAGTCGCCTGATTTTGCCAGCCCTTCGTTTCACTCATTCAAAGCAGCAGAAAGACCAATGGTGGATCCTTACTTTGATTTTGATGCCAATTATATGGAATCGAGTAAACTAGACTCTTCTCAAAGTGCCTCAACCTCTACCCTTTCTGCTCCTCAAAGATTTTATTCAGATGGGATGAGACCTGAGTTTGACTTTGGGGCATTAGGCATATACAATGCCCCAGGTTGGAGGGTTGAGCTTCCTGATGGTTCAGGAGGTACTCAAGCTGTTGAGGTTCCAAGGGCACCATTGGCGGAAGGATTGCCTCTGCCTCCAAACATACAGGAGCCACACAAGGCTGCTTATGAGTATTTGTTTGAGCTAGTTGCTGGCCTGAAACATATGATTGTAACAAGGGAGACTGAGAACAGGGCCCCTGTGTCTGCTTTGAGAAGTAGAACTAGGAAACGAGAAGGTAAGGGTAACTCATAG 2067 0.4209 MDPRKERIKNGCLKILEGINSMSLVNLDDQQVHSLVMMREIARGVVDDRDRKVTKSDVITALRHSIEKMVCASRDIIQILSRMSFEGLDDQSMHLVMRMKEIANGVIDKQPRVAITRPDLLAEQVGFVDEGMRDSPVVESTKISNGYVPIGGAQSMTNEDEMLDVEHVLRFENGIDEVHESLLPCFQQFLLWPPDDCVTLEWVQDMMVILEQASQKMLPSEFCHIVPAILVDKLADAACSILCKEPNCVEINCQGEDSKVIVVGDVHGQFHDLMFLFKHAGVPSENRIYVFNGNYVDKGAWGIEVFLFLLAWKVLMPHRVYLLRGNHESRYCTARYGFKKEVWAKYGDQGEDVYNKFLACFKELPLASVIANCVYTTHGGLFRSIHAAPSQKPKRNKTHRVDLGSLAELSEVKRSFVDCPYEGPNILLSDVLWSRPSNRDGLRDNTGQKLGLLWGPDCTEAFLKQYNLKLIIRSHEGPDARAGRDDDFGDMLSGYSIDHDGESGRLYTLFSAPDYPQFGKRRYNNKGAYAVLKSPDFASPSFHSFKAAERPMVDPYFDFDANYMESSKLDSSQSASTSTLSAPQRFYSDGMRPEFDFGALGIYNAPGWRVELPDGSGGTQAVEVPRAPLAEGLPLPPNIQEPHKAAYEYLFELVAGLKHMIVTRETENRAPVSALRSRTRKREGKGNS 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03120 688 MobiDBLite consensus disorder prediction 674 688 - -
Gma13g03120 688 ProSitePatterns Serine/threonine specific protein phosphatases signature. 323 328 IPR006186 GO:0016787
Gma13g03120 688 SMART pp2a_7 226 549 IPR006186 GO:0016787
Gma13g03120 688 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 4 677 - -
Gma13g03120 688 MobiDBLite consensus disorder prediction 669 688 - -
Gma13g03120 688 PRINTS Serine/threonine phosphatase family signature 259 286 IPR006186 GO:0016787
Gma13g03120 688 PRINTS Serine/threonine phosphatase family signature 289 316 IPR006186 GO:0016787
Gma13g03120 688 PRINTS Serine/threonine phosphatase family signature 322 346 IPR006186 GO:0016787
Gma13g03120 688 PRINTS Serine/threonine phosphatase family signature 359 385 IPR006186 GO:0016787
Gma13g03120 688 PRINTS Serine/threonine phosphatase family signature 505 521 IPR006186 GO:0016787
Gma13g03120 688 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 4 677 - -
Gma13g03120 688 Gene3D - 195 586 IPR029052 -
Gma13g03120 688 SUPERFAMILY Metallo-dependent phosphatases 221 557 IPR029052 -
Gma13g03120 688 Pfam Calcineurin-like phosphoesterase 259 478 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03120 Gma-Chr13 45394658 45401172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03120 190 470 Calmodulin-binding Proteins AT5G63870 52.577 5.07e-100 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03120 K04460 - gmx:100779241 1127.46