Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03110 ATGGCTTCAAATGCAGGAGAAGAAGAGTCTACCGTGATCGCCATTGATAGCGACCGGAACAGCCTACACGCCGTCAAGTGGGCTGTGGAACATCTTTTGAAGAAGAACGCTTCTTGCACCCTCATTCACGTCAGAACCAAGACTTTGTATTCACATGATTTTGAGGTTATCCCTAAACAAGGTCGTCTGCCAACAGAAGAAGAATTGCACCAATTTTTTCTTCCCTTTCGAGGATTTTGTGCACGAAAAGGGATCGTAGCCAAGGAGTTAGTCCTGCATGACATTGACGTTTCAAATGCGCTTACTGATTACATCATTGACAACTCTATCAGCAATATCGTTGTTGGCGCTTCCCGCTGGAATGCTCTTATAAGGAAATTTAAAGATGCAGATGTGGCAACAAGCTTAGTCAGATCTGTGCCAGAGACTTGCACGGTGCATGTTATATCAAAAGGAAAAGTGCAGAATATTCGACCTGCAGGCCATTCTCAAAATATTAGTAACGCACTATCAAAATCTTTAAAAGGCATCAAAGGAAGTTTTCAGTCTGAAGATTTAAACAGATACAATATTAAAGAAATTGAAGTTGCAACTAATTACTTTGACAATGCCCTCAAAATCGGTGAAGGTGGTTATGGACCTGTTTTTAAAGGAGTGCTTGATCACACTGAGGTTGCAATCAAGGCCCTCAAACCAGACATATCCCAAGGGGAAAGGCAGTTTCAACAAGAGGTTAATGTTTTGAGCACAATAAAGCATCCAAACATGGTTCAACTGCTAGGTGCCTGTCCAGAGTACGGGTGCCTTGTATATGAGTACATTGAAAATGGTAGCTTAGAAGATCGCCTCTTCCAAAAAGATAACACTCCAACAATTCCATGGAAAGTTCGATTCAAAATAGCATCAGAAATTGCCACTGGCCTTCTTTTCCTTCACCAGACAAAGCCTGAGCCGGTTGTGCATCGTGATCTCAAGCCAGCAAACATTTTGTTGGACCGCAACTATGCGAGCAAGATCACTGATGTGGGTTTGGCAAGGCTAGTTCCTCCTAGTGTAGCCAACAAAACCACTCAATACCACAAGACAACTGCAGCTGGTACATTTTGCTACATTGACCCAGAATATCAACAAACTGGACTATTGGGTGTAAAATCAGACATATATTCATTAGGTGTAATGCTGCTACAAATTATCACTGGAAAACCTCCAATGGGTGTGGCACACCTTGTTGAGGAGGCTATAGACAAAGGTAAACTCCAAGAGGTGCTTGATCCAAATGTCACAGATTGGCCCCTTGAAGAGACTTTATCATATGCTAGGTTGGCTTTGAAGTGTTGTGAGATGAGAAAACGGGATAGACCAGACCTTCGTTCTGTCATTTTGCCAGAGCTGAATCGACTCCGAAATCTGTGA 1413 0.426 MASNAGEEESTVIAIDSDRNSLHAVKWAVEHLLKKNASCTLIHVRTKTLYSHDFEVIPKQGRLPTEEELHQFFLPFRGFCARKGIVAKELVLHDIDVSNALTDYIIDNSISNIVVGASRWNALIRKFKDADVATSLVRSVPETCTVHVISKGKVQNIRPAGHSQNISNALSKSLKGIKGSFQSEDLNRYNIKEIEVATNYFDNALKIGEGGYGPVFKGVLDHTEVAIKALKPDISQGERQFQQEVNVLSTIKHPNMVQLLGACPEYGCLVYEYIENGSLEDRLFQKDNTPTIPWKVRFKIASEIATGLLFLHQTKPEPVVHRDLKPANILLDRNYASKITDVGLARLVPPSVANKTTQYHKTTAAGTFCYIDPEYQQTGLLGVKSDIYSLGVMLLQIITGKPPMGVAHLVEEAIDKGKLQEVLDPNVTDWPLEETLSYARLALKCCEMRKRDRPDLRSVILPELNRLRNL 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03110 470 CDD STK_N 10 152 - -
Gma13g03110 470 Pfam Universal stress protein family 12 145 IPR006016 -
Gma13g03110 470 ProSiteProfiles Protein kinase domain profile. 201 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g03110 470 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 12 148 - -
Gma13g03110 470 SUPERFAMILY Protein kinase-like (PK-like) 181 460 IPR011009 -
Gma13g03110 470 Gene3D Phosphorylase Kinase; domain 1 174 273 - -
Gma13g03110 470 SMART serkin_6 201 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g03110 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 319 331 IPR008271 GO:0004672|GO:0006468
Gma13g03110 470 Pfam Protein kinase domain 205 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g03110 470 Gene3D HUPs 9 150 IPR014729 -
Gma13g03110 470 Gene3D Transferase(Phosphotransferase) domain 1 274 469 - -
Gma13g03110 470 PANTHER OS02G0152300 PROTEIN 187 470 - -
Gma13g03110 470 PANTHER OS02G0152300 PROTEIN 10 173 - -
Gma13g03110 470 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 187 470 - -
Gma13g03110 470 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 10 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03110 Gma-Chr13 45300788 45305176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03110 188 470 Receptor kinase-like Gene Family AT5G12000 71.378 1.30e-151 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gma13g03110 Pkinase 8.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03110 - - pvu:PHAVU_005G156500g 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03110 13 45300788 45305176 Gma15g00255 15 2218182 2222813 GST
Gma07g00332 07 2877782 2883289 Gma13g03110 13 45300788 45305176 PCT