Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03106 ATGGAGGCGCTAAGTCGCTCCGTGGAAGACGTATTCGAGGATTTCAAGGGCCGAAGAGCCGGCATCATCAAAGCTCTTACCACCGATGTTGAAGATTTCTACAGCCAATGTGATCCTGAGAAGGAGAATTTGTGCTTATATGGATCACCTAATGAGCAATGGGAAGTAAATTTACCCGTTGAAGAAGTTCCTCCAGAGCTTCCTGAGCCTGTCCTGGGCATTAACTTTGCTAGGGATGGCATGCAGGAAAAAGACTGGTTATCATTAGTTGCTGTTCATAGTGATACATGGTTACTTGCCCTTGCCTTTTATTTTGGAGCCAGATTTGGATTTGATAAAACTCACAGGAATCGACTATTCAGTATGATCAATGAACTACCAACAATATTTGAAGTTGTTACAGCAAAGAAACAAGTTAAAGAGAAGTCTTCGGTTTCAAACAACAGTGGCAGCAAATCTAAGTCTAACTCTAAAGCGATAATTTGTGTTCTTATCAAATTGCTGGCTGGTGGAGCAGCGGGCTTCCGAAACCCAGGGCAGACAATCAAAGCCATTACAACCAAAAGATGA 570 0.4263 MEALSRSVEDVFEDFKGRRAGIIKALTTDVEDFYSQCDPEKENLCLYGSPNEQWEVNLPVEEVPPELPEPVLGINFARDGMQEKDWLSLVAVHSDTWLLALAFYFGARFGFDKTHRNRLFSMINELPTIFEVVTAKKQVKEKSSVSNNSGSKSKSNSKAIICVLIKLLAGGAAGFRNPGQTIKAITTKR 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03106 189 PANTHER CPG BINDING PROTEIN 1 159 IPR045104 GO:0006355|GO:0042393
Gma13g03106 189 Pfam Alfin 7 134 IPR021998 GO:0006355|GO:0042393
Gma13g03106 189 PANTHER ALFIN-LIKE TRANSCRIPTION FACTOR 1 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03106 Gma-Chr13 45280944 45284486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03106 6 164 Alfin-like Transcription Factor Family AT5G20510 73.913 1.15e-78 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03106 - - gmx:100170696 273.478