Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03105 ATGTTCTTCCATAACAATGCCACAAGAGCAAGACATTTAGTTTTCAATTCCAAGAACACGATGCATCTTCAACTAAATCCACTGAACAATCTTATCCTGAAGTTGGTACGACACAATCCGGTCAAATTTCTGTCCAGCATAGTTCTACTGATTCAATACTTATTAGAACTGGGGGAAAGAACAAATACTTTGGAAACTGCTCCAGCTCGAATTCCTCCTATGCCATTGGATGGCTCGGAAGAACCCATATATGTGAATTCAAAGCAGGACCATGCTATTCTGAGGCGAAGACAGTGTCGAGCAAAACTCGAAGCACTTAACAAACCCATCAAGGATCGGAAAGTGGTAACATAG 354 0.4124 MFFHNNATRARHLVFNSKNTMHLQLNPLNNLILKLVRHNPVKFLSSIVLLIQYLLELGERTNTLETAPARIPPMPLDGSEEPIYVNSKQDHAILRRRQCRAKLEALNKPIKDRKVVT 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03105 117 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR 64 114 - -
Gma13g03105 117 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 81 114 IPR001289 GO:0003700|GO:0006355
Gma13g03105 117 ProSiteProfiles NF-YA/HAP2 family profile. 79 117 IPR001289 GO:0003700|GO:0006355
Gma13g03105 117 Gene3D - 79 117 - -
Gma13g03105 117 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 64 114 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03105 Gma-Chr13 45276748 45280881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03105 73 114 CCAAT-HAP2 Transcription Factor Family AT1G30500 64.286 1.50e-12 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Gma13g03105 CBFB_NFYA 4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03105 K08064 - gmx:100803893 80.4925