Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma13g03098 | ATGGAATACCCTTTTTCCCCAAAGGATAGAGTAATTGGGGATTGGCAATCTTCTGGAGCTCAGTTGGAGGGATCAGCATCATTAGATGGCAGAATGAGCAATTCAATATCAGAGGATATGCCCAATAGCTTTTCTGAGCTCATGAACTTTGATACTTATGCTGGGTTGTGCTACAGCCCATCCATAACGGATCAGATTTTGGCTAATGAGCTTCCATCATTTGCCCCATTATCATATCCATTGCCTGATGGGTTCAATCCAGTCCAACTGAACAGTGGGCAATGCTGTATGTCAGGAGTTGGCAGAAATAACAATGATACCGAAAACTCTTCCCTTTATGGGGAGAAAGTTGTTTGTCAGCAAATGGACACCCTACTTGGTTTCTTAAACGACACAAACGAAGCAAACAACTTGAATTCTAAGCTAAAAATTAATGTCTCTTCTCAACATCTTAATAACTCTGATACAGGCAATTATATGATGTCTAGGCCACCTGGCCTGTCACTTGATGAGAGAATGCTGAGGGCTTTGTCCTTCTTTAAGGAATCAGCTGGTGGGGGAATATTGGCACAAGTTTGGGTACCCATAAAGGATGGTGACCAATTCATCTTAAGCACGAGTGAGCAACCTTATTTGCTAGATCAAATGCTTGCAGGGTATCGTGAAGTGTCCAGGACATTTACATTTTCTGCAGAAGGAAAATCTGGTTGTTCCCTAGGACTTCCTGGTCGTGTGTTTACCTCCAAAGTCCCTGAGTGGACTTCAAATGTTGGTTATTACAGTATGAGCGAGTACTTAAGGTTCGAGCATGCAATTAATCACAAGGTTTGTGGATCAATTGCATTTCCCATATTTGATCTGCATTCTGAACTGCCATGCTGTGCTGTACTGGAACTTGTCACCACAAATGAAAAGCCAGATTTTGACAGAGAATTGGAAATTGTTTGTCGTGCACTACAGGCATGTTTTTATTTTTCCAGTCTTGTAAATTTAAGGACTGCCAAGCCTCTCCGATGTCTTCCCCAGTGTCTTTCAAACAACAAAAAGGCTACTTTGACTGAGATAGTTGATGTGTTACGATCTGTCTGTCATGCACATAGGTTACCGCTGGGACTGACATGGATTCCCTGTTGTTTCACTGAGTGCTCAAGAGGTGAAGCTTCAAGCATACGAATTGAAGGTGGTCATTCAACTTCTAGAGGTAAAAACATACTGTGCCTTGAAGAATCTGCTTGCTATATTACTGATAGAGCAATGGGAGGATTTGTCCGTGCATGCATGGAACATCGTCTTGAGGAAGGGAAAGGTATAGCTGGGAAAGCTCTTCAATCAAATCATCCTTTCTTCTATCCTGATGTGAAGACATATGATATTAGTGAATACCCACTTGTCCATCATGCACGCAAGTATAATTTGAATGCTGCAGTTGCAATTAGGCTAAGGAGTACTTATACTAATGATGATGATTACATATTGGAATTCTTTCTGCCTGTCAATATGAAAGGTAGTTCAGAGCAGCAACTTTTATTAGACAACCTCTCAGGTACCATGCAGAGAATTTGTAGTAGTTTGAGGACAGTTTCAGAAACCGAATTATCAGGAATGGAAAGCTTAGCAGTGGGGCTTGGAAAGAAAAATGCCCCCAGTTTTTTTCCTTTATCAAGTAGAAACTCTGAAATACCATTAATAAATGGTGACTGCGATTCTGTCCAGAAGGCAACTAACCTAAGGGACAATGAAATTGAGTCTTCTCCTAACCAGGAAAGAAATGGATCAAAAAGACAGGTCCAGAAAAATAGAAGTACATCAGAGAAGAATGTTAGCTTGAGTGTCCTCCAACAATACTTTTCTGGTAGTCTGAAGGATGCCGCAAAAAACATTGGTGTTTGCCCAACGACTCTGAAAAGGATATGCAGACAACATGGAATTCCAAGGTGGCCATCCCGCAAGATTAATAAAGTGAATCGATCATTGAAGAAGATACAGACggtgcttgactctgtccagggcgtagaaggagggttgaaggtgcttgactctgtccagggcgtagaaggagggttgaagTTTGATCCATCTATGGGGGCATTTGTGGCAGGAGGGTCAATCATCCAGGAAATTGATGCACATAAAAGTACTATAAAAGACCCTGTGCCTGTTGCACAAGATGCATTCTCAGTACGACCAGCACCTTGTAGTGAAGGTGAAAATTTTTCAATTAAGTTGGAGGGAAAATTGAAGAAAACCAATGTTTCTTCAGTTAATTACAGTGAAGATTCAAAATCAATGGCAATCAATGATGGGTCGTGCCAGACGGCAAGCCTTTGCACCAAGGTGCAGGATTGTCCTGAACAAGCTTGTTTGGGTTCTGTTCTTGCAAAAGAACATGATAAACGAATTCTGAACAAGGGCGGTTTGAGTGTAGAAAAATTTAAACGCAATATTGTTGGCCAGAGTTCAAAAACTTTGATTGGTGATGAGATGGACATTGGTGTAGATGGGGATGATGGAGTTGTTGAACGTAACCACCCTACTTCCTCAAGCTTGATAGACTCATCTAATGGCTCTGGTTCAATGATGCATAGCAGTTCATCAGGTTCTCAGAGCTTTAAGAACCAGGATCAGTCCAAAGTCAAATCAACCATTGTTGATAGTAGGTCGAAACTAATTGTCAAAGCTACCTATAGAGAAGACACCATTCGTTTCAACTTTGATCCATGTGCAGGTTGTTTCAGTCTATATGAAGAAGTTGCGGCAAGATTCAAACTACAAAATGGGTTATTCCAGCTCAAATATCTAGATGATGAAGAGGAATGGGTGATGTTGGTGAATAATGCTGATTTGCAAGAGTGTATAGAAATATTGGATGATATTGGCACACGTAGCGTCAGGTTTCTTGTTCGTGATATGCCTTCCGTTTTAGGCAGTTCTGGCAGTAGCAATAGCTACTTGGGAGGCAGCTCATAG | 2967 | 0.3994 | MEYPFSPKDRVIGDWQSSGAQLEGSASLDGRMSNSISEDMPNSFSELMNFDTYAGLCYSPSITDQILANELPSFAPLSYPLPDGFNPVQLNSGQCCMSGVGRNNNDTENSSLYGEKVVCQQMDTLLGFLNDTNEANNLNSKLKINVSSQHLNNSDTGNYMMSRPPGLSLDERMLRALSFFKESAGGGILAQVWVPIKDGDQFILSTSEQPYLLDQMLAGYREVSRTFTFSAEGKSGCSLGLPGRVFTSKVPEWTSNVGYYSMSEYLRFEHAINHKVCGSIAFPIFDLHSELPCCAVLELVTTNEKPDFDRELEIVCRALQACFYFSSLVNLRTAKPLRCLPQCLSNNKKATLTEIVDVLRSVCHAHRLPLGLTWIPCCFTECSRGEASSIRIEGGHSTSRGKNILCLEESACYITDRAMGGFVRACMEHRLEEGKGIAGKALQSNHPFFYPDVKTYDISEYPLVHHARKYNLNAAVAIRLRSTYTNDDDYILEFFLPVNMKGSSEQQLLLDNLSGTMQRICSSLRTVSETELSGMESLAVGLGKKNAPSFFPLSSRNSEIPLINGDCDSVQKATNLRDNEIESSPNQERNGSKRQVQKNRSTSEKNVSLSVLQQYFSGSLKDAAKNIGVCPTTLKRICRQHGIPRWPSRKINKVNRSLKKIQTVLDSVQGVEGGLKVLDSVQGVEGGLKFDPSMGAFVAGGSIIQEIDAHKSTIKDPVPVAQDAFSVRPAPCSEGENFSIKLEGKLKKTNVSSVNYSEDSKSMAINDGSCQTASLCTKVQDCPEQACLGSVLAKEHDKRILNKGGLSVEKFKRNIVGQSSKTLIGDEMDIGVDGDDGVVERNHPTSSSLIDSSNGSGSMMHSSSSGSQSFKNQDQSKVKSTIVDSRSKLIVKATYREDTIRFNFDPCAGCFSLYEEVAARFKLQNGLFQLKYLDDEEEWVMLVNNADLQECIEILDDIGTRSVRFLVRDMPSVLGSSGSSNSYLGGSS | 988 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma13g03098 | 988 | MobiDBLite | consensus disorder prediction | 841 | 875 | - | - | |
| Gma13g03098 | 988 | PANTHER | PROTEIN NLP8 | 7 | 676 | IPR045012 | GO:0003700 | |
| Gma13g03098 | 988 | Pfam | RWP-RK domain | 606 | 654 | IPR003035 | - | |
| Gma13g03098 | 988 | MobiDBLite | consensus disorder prediction | 578 | 605 | - | - | |
| Gma13g03098 | 988 | PANTHER | PROTEIN NLP8 | 743 | 984 | IPR045012 | GO:0003700 | |
| Gma13g03098 | 988 | SMART | PB1_new | 888 | 970 | IPR000270 | GO:0005515 | |
| Gma13g03098 | 988 | PANTHER | PLANT REGULATOR RWP-RK FAMILY PROTEIN | 677 | 743 | - | - | |
| Gma13g03098 | 988 | MobiDBLite | consensus disorder prediction | 578 | 592 | - | - | |
| Gma13g03098 | 988 | PANTHER | PLANT REGULATOR RWP-RK FAMILY PROTEIN | 743 | 984 | - | - | |
| Gma13g03098 | 988 | ProSiteProfiles | PB1 domain profile. | 888 | 970 | IPR000270 | GO:0005515 |
Showing 1 to 10 of 17 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma13g03098 | - | - | gmx:100812210 | 1872.06 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma13g03098 | 13 | 45234191 | 45239938 | Gma13g03098 | 13 | 45234191 | 45239938 | ECH | |
| Gma13g03098 | 13 | 45234191 | 45239938 | Gma15g00266 | 15 | 2288704 | 2296720 | GST | |
| Gma13g03098 | 13 | 45234191 | 45239938 | Gma12g00448 | 12 | 3655240 | 3659576 | PCT | |
| Gma13g03098 | 13 | 45234191 | 45239938 | Gma11g01148 | 11 | 9655663 | 9660015 | PCT | |
| Gma12g00448 | 12 | 3655240 | 3659576 | Gma13g03098 | 13 | 45234191 | 45239938 | PCT | |
| Gma11g01148 | 11 | 9655663 | 9660015 | Gma13g03098 | 13 | 45234191 | 45239938 | PCT |
Showing 1 to 6 of 6 entries