Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03089 ATGAGCCCAGTAAGGGATCGAGCCTCGGAGGAGGGAATCGCAGCGAAGTCCACTATGCCGAAGCAAATTCACGAGATTAAGGACTTCCTCCTCACTGCTAGGAGGAAGGATGCACGCTCTGTGAAAATCAAGCGGAGCAAGGATGTGGTGAAGTTCAAGGTCCGTTGCTCCAAGTACCTTTACACCCTCTGTGTGTTTGATTCTGAGAAGGCTGATAAGTTGAAGCAATCACTTCCTCCAGGTTTAAGCGTGCAGGATGTGTGA 264 0.5 MSPVRDRASEEGIAAKSTMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDV 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03089 87 Gene3D - 19 87 IPR038464 -
Gma13g03089 87 PANTHER - 19 87 - -
Gma13g03089 87 Pfam Ribosomal L38e protein family 20 87 IPR002675 GO:0003735|GO:0005840|GO:0006412
Gma13g03089 87 PANTHER 60S RIBOSOMAL PROTEIN L38 19 87 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03089 Gma-Chr13 45169526 45171097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03089 19 87 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.203 3.21e-44 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03089 K02923 - mnt:112094472 140.198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03089 13 45169526 45171097 Gma13g03089 13 45169526 45171097 ECH
Gma13g03089 13 45169526 45171097 Gma15g00273 15 2359116 2360665 GST