Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03084 ATGGATAAAGACAAATCTCTAGGTTTGCCACCTCCGTCTGGACGTTATTCCGGTTACTCGCCCACCAGAAGTGTTTTCAATGTGAAATCTGAGCCGTCGCCGTCGTCATCGTCGACGACGTCGTATCCGCCACTGGCTCTGGGAACCACCAGTTCCGAGTCTAGTCATTTTGGACATGGAATGTCCACGGATTCTAGTGGGTTTAGTCATGATATTAGCAGAATGCCTGATAATCCCCCGAGAAACAGAGGTCATAGGCGTGCTCATTCGGAGATTCTCACTTTACCGGATGATATTAGCTTCGACAGTGACCTTGGTGTTGTTGGAGCTGGTGATGGGCCTTCGTTCTCCGATGACGCCGAGGAGGACTTGCTTTCCATGTACCTTGATATGGATAAGTTCAATTCATCGTCGGCGACATCCACCTTTCAAATGGGCGAGCCGTCTAATGCTGTGGGAGCATCGGCTTCAACGCCGGGGTCAGGGGCACCCAACTATTCTGCAGAGAATGTTGTTTTTGGGACTATTGAAAGGCCCAGAGTTAGACACCAGCATAGTCAATCCATGGACGGGTCAACCACCATCAAGCCTGAGTTGCTGGTCTCGGGTTCGGAAGACATGTCGGCGGCTGATTCCAAAAAAGCAATATCAGCTGCCAAGCTTGCTGAGCTTGCCTTGATTGACCCCAAACGTGCAAAAAGGATATGGGCAAATAGGCAGTCTGCTGCGAGGTCAAAAGAGAGAAAGATGCGATACATTGCTGAGCTTGAAAGGAAGGTGCAAACATTGCAAACAGAAGCAACATCTTTGTCTGCACAATTAACTCTCTTGCAGCAGAGAGATACAAATGGCTTAAATTCTGAGAACAGTGAACTGAAGCTGCGGTTGCAAACCATGGAGCAACAAGTTCACTTGCAAGATGCATTAAACGATGCATTAAAAGAGGAAATTCAGCATTTGAAAATATTGACTGGGCAAGTTATGGCACCTAATGGAGGACCTATGATGAAGCTTGCTTCTTTTGGAGGGGGGCAGCAATTCTATCCCAATAATCATGTCATGCACACTCTTttagctgcacaacagtttcaacagctacaaattcaccctcaaaagcagcagcagcaacaacatcagcatcagtttcagcagtttcagcagcaacatcagcatcagcatcagcagcaccaacaatcaagtgacttgaaaatgagagaaaCTTCACCTACTCCATGCCCCAAAGACAATACTTCGTCAGATGTAAATCCTTCTGGAGCCAAGGATTGTTGA 1290 0.4202 MDKDKSLGLPPPSGRYSGYSPTRSVFNVKSEPSPSSSSTTSYPPLALGTTSSESSHFGHGMSTDSSGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGAGDGPSFSDDAEEDLLSMYLDMDKFNSSSATSTFQMGEPSNAVGASASTPGSGAPNYSAENVVFGTIERPRVRHQHSQSMDGSTTIKPELLVSGSEDMSAADSKKAISAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQQRDTNGLNSENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKILTGQVMAPNGGPMMKLASFGGGQQFYPNNHVMHTLLAAQQFQQLQIHPQKQQQQQHQHQFQQFQQQHQHQHQQHQQSSDLKMRETSPTPCPKDNTSSDVNPSGAKDC 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03084 429 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 6 420 - -
Gma13g03084 429 Pfam bZIP transcription factor 230 278 IPR004827 GO:0003700|GO:0006355
Gma13g03084 429 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 6 420 - -
Gma13g03084 429 MobiDBLite consensus disorder prediction 140 166 - -
Gma13g03084 429 SUPERFAMILY Leucine zipper domain 230 279 IPR046347 GO:0003700|GO:0006355
Gma13g03084 429 MobiDBLite consensus disorder prediction 369 429 - -
Gma13g03084 429 MobiDBLite consensus disorder prediction 17 72 - -
Gma13g03084 429 SMART brlzneu 226 291 IPR004827 GO:0003700|GO:0006355
Gma13g03084 429 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 228 292 IPR004827 GO:0003700|GO:0006355
Gma13g03084 429 Coils Coil 246 280 - -
Gma13g03084 429 CDD bZIP_plant_RF2 231 280 IPR044759 GO:0003700|GO:0006355
Gma13g03084 429 Coils Coil 282 316 - -
Gma13g03084 429 MobiDBLite consensus disorder prediction 140 165 - -
Gma13g03084 429 MobiDBLite consensus disorder prediction 1 86 - -
Gma13g03084 429 Gene3D - 229 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03084 Gma-Chr13 45125446 45129130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03084 15 360 bZIP Transcription Factor Family AT1G06070 70.621 5.68e-165 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma13g03084 bZIP_1 1.7e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03084 - - gmx:778194 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03084 13 45125446 45129130 Gma13g03084 13 45125446 45129130 ECH
Gma13g03084 13 45125446 45129130 Gma15g00277 15 2416654 2421497 GST
Gma13g03084 13 45125446 45129130 Gma11g01157 11 9758271 9766151 PCT
Gma11g01157 11 9758271 9766151 Gma13g03084 13 45125446 45129130 PCT