Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03077 ATGAAAATCTTATATAGCAGATCTTTTGTTGCTGCAGTTGAGTTTGGGATTGATGGCTCCATTAATGTTGAGACAGTAGGAAATGCTACTGTAGTGCAGATTAGTAGCAGCACAATTGATGAGAACAAAGTAGGCTGCATTTCTTTTAATCCGAAGCTGCAGCACATGCATTCTATAATGCATATGCTACACGTGTTGGATTCATCATACGTGTTAAGTAAGCTCTCACGACCAAGGCGTGATGGAACTAATATTGGACGGGCTCTTGTTTGCAACAGAGAAGGTTACAGAATGCCTGACAAACGTGAAAAGATTGTAAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTTTGGTTAGGAGAGTAAGTTCTGGTAAATGGGTTGTTACAAAGTTTATAATGGAACACACACATCCTTTGACACCTGGAAAAGGTAGAAGGGATTGCATTTATGAGCAATATCCGGTGAGTTAG 483 0.4099 MKILYSRSFVAAVEFGIDGSINVETVGNATVVQISSSTIDENKVGCISFNPKLQHMHSIMHMLHVLDSSYVLSKLSRPRRDGTNIGRALVCNREGYRMPDKREKIVRQRAETRVGCRAMILVRRVSSGKWVVTKFIMEHTHPLTPGKGRRDCIYEQYPVS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03077 160 Pfam FAR1 DNA-binding domain 73 144 IPR004330 -
Gma13g03077 160 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 72 158 - -
Gma13g03077 160 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 72 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03077 Gma-Chr13 45092669 45093151 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma13g03077 FAR1 1.1e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03077 - - gmx:100806900 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03077 13 45092669 45093151 Gma13g03077 13 45092669 45093151 ECH
Gma13g03077 13 45092669 45093151 Gma15g00285 15 2460294 2468475 GST
Gma13g03077 13 45092669 45093151 Gma12g00463 12 3791019 3792890 PCT
Gma13g03077 13 45092669 45093151 Gma11g01164 11 9798396 9801578 PCT
Gma12g00463 12 3791019 3792890 Gma13g03077 13 45092669 45093151 PCT
Gma11g01164 11 9798396 9801578 Gma13g03077 13 45092669 45093151 PCT