Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03060 ATGGATCCAGAAAGATCAGTAGAGGATCAATTCTCCAAGCTGCATCCTTCCATGCCAGTAAACACCAGAATTGGAATAGTGGGTGCTGGTCCAAGTGGCTTATCAGTTGCTTATGCACTGGTCAGACTTGGTTATAATAATATCACTGTCTTGGAGAAGCATCATACAGTTGGTGGCATGTGTGAATCAGTTGAAATTGAAGGAAAAATATATGATCTAGGTGGCCAAGTTTTGGCTGCAAGCAGTGCTCCTGTCATCTTTCACTTGGCAAAAGAGACAGGCTGTACACTAGAAGAAATGAACTCCCACAAGCTTGCTGTTATTGACAGCTCCTCTGGAAAATACCAAGATGTTAAAGTTGCTGATGATTATGTATCTGTTATGTCACTAACATTGCAAATCCAAGAAAAGGTGAAGAATTCTGGTCGTTTTGGGGTTCATGCTCTCAGTGAAGTTGCTTCAGACTTAGCTCCAGATTATCTTGAGCGTCATGGACTTAAATCTGTTCCTAAATCTGTGGCTTATGGTTATACTGCTTCAGGATATGGATTTATTCAAGACATGCCTTATGCTTACATTCATGAATTTACCAGAACTTCCATGGCTGGAAAAATTCGACGATTCAAAGGTGGATATACAAGTCTTTGGCAGAGGATTGCTGAATCAATTCCAATAAAACTTCACTATAGCACTGAGGTGTTGGCAATCAGGCGGAACTCTGACACTGTCACTGTTAATGTCAAGGGCTCAAATGAAATCGAAACTATGGAATTTGATAAGATCATAATCTCTGGTAACTTTCCATTAAAATATGGAAGAACTTATAGATCGGCGCCTTCAACTTGCTTAGAGAATGAAACAGAAGTAATGGATGCAAGTGAGCTTGAAAAGGATTTATTCAGCAAAGTAGAAACAAATGACTACTACACAACAGTTTTAAAGATCAAAGGGCTGGAACGTATGCCGGTTGGATTTTATTATTTTAGTGAATATATGGAAGATCCCAGCACAATTGGAAATCCAGTTGCCATGCAGAAATTTTATGCTGACAGTAACATATTCTTGTTCTGGTCCTATGGAAACTCTGCTGATATTAAGGGACCAACTGTCACTGAGCTTGCAATCAAATCAATAGAATCCATGGGGGGAGAAGTTCAGAATATCATTCTTCAACGTCGCTTTAAGTATTTTCCTCATGTTAGCAGTCAAGATATGAGAAACGGATTCTATGAAAAGTTGGAGTCAGAGCTTCAAGGCTCGAGGAATACTTATTATGTTGGTGGGCTTATGGCATTTGAGCTTACAGAGAGAAATTCATCTTATGCCATGGCTTTGATCTGCAAGAACTTTGCAAATAGCAGTGATTTGCCAGTGTTTCCTTACACTAAGAGTTTGTTTCCCTTGCAAACTGATATCCAGAAAAAGGAGCCTAAAGAACTAGTTGAATTGCCTGGAGTGCAATTTCCCAATTTGCCTGCTTTGAATAGCTATTTAAAGCACTGGGGAACTCATCCAATCACTCAAAACAGAACTCTTTATACTTGGCTAAATGAAGGAGGGACTGTGGTTGGCAAGAGGACATATGGAGAACAACATTTAAATGCTTCTTGCATTGCACATAAGCTCTTAACAAGCCAAAAGCCGGTTATCAAGCCTGGTGACAGGGTTCTCCTAGTCTATGTTCCTGGCCTAGATTTTGTTGATGCCTTCTTTGGATGTCTAAGAGCTAAAGTTTTACCAGTCCCAGTTCTTCCCCCAGACCCCATGCAGAGAGGTGGACAAGCACTTCTTAAAATTGAGAACATTGCCAAGTCATGCGGCATAGTGGCAATTTTATCAACGGCATCTTACCACACAGCAGTACGTGCCGGTCTAGTGAAAAGCTTGATCTCATTAACTGGGAAAAATGGTAAATACACAGCTCAATGGCCAAAACTTCCGTGGCTGCACACCGATACTTGGGTCAATAACTCAAGAAATTCGGCTGTGGAAGATGTAGATGATCAATGTGAACCCCAGCCTGGTGATGTATGTTTCTTGCAGTTTACCTCAGGTTCAACTGGTGATGCTAAAGGAGTCATGATAACACATGGAGGGCTCGTTCACAATGTGAAGTTGATGAGAAGTAGATACAAGAGCACCTCAAGGACAGTGCTAGTGAGTTGGCTTCCTCAATATCATGACATGGGGCTGATTGGAGGACTTTTTACAGCTCTTGTTAGTGGTGGATCTGCTGTACTGTTTTCACCATTGACATTTATTAAGAAGCCACTCTTATGGCTTGAAACCATCAGCAAGTATCAAGCAACTCACAGTGCCGGACCCAACTTTGCTTTTGAGTTGGTGGTTCGAAGGTTAGAGTCCGAGAAAGACAAGCTTCAGAGTTTAGACCTTTCATCCATGATTTTCCTTATGGTTGCTGCTGAGCCAGTGAGGATGAAGACCTTGAAAAGATTTCTTGATCTAACCACTCCTTTTGGCTTATCTCAAAAGGTGATGGCTCCAGGATATGGCTTAGCAGAAAATTGTGTGTTTGTGAGTTGTGCATTTGGAGAAGGATGTCCTATTCTTGTTGATTGGCAAGGAAGAGTTTGTTGTGGATATATTCACCCAGGCGATTCAGACGTTGACATTATAATAGTTGATCCAGAGAGTGGTGAAGAGCTTGAGGAAGATGGAAGGGAAGGAGAAATCTGGATAAGTAGTCCAAGTGCTGGAATAGGATACTGGGGAAAGGAAGAACTGAGTCAGAAAACTTTTAGAAATAAGCTTCAGAACCATCCTGGACGCAACTACACAAGAACTGGAGACTTGGGAAGAATTATAGATGGGAAGCTATTCATCACTGGGAGAATCAAGGATCTTATCATTGTGGCTGGAAGAAACATCTACTCAGCAGATGTTGAAAAGACGGTTGAGAGTTCATCTGAATTTCTTCGTCCGGGATGCTGTGCAGTCATTGGTGTCCCTGAGGAGATTTTATCAGCAAAGGGGATTTCCCTGCCAGATGGATCAGACCAAGTTGGCTTGGTTGTGGTTGCTGAAGTAAGGGATGGTAAAACAGTTAGCAAAGATGTGATTGAGCATATTCAGACACGTGTGGTTGAAGAACATGGAGTTAGTGTTGCTTCTGTCAAGTTGATCAAGCCAAGAACCATCAGCAAAACAACATCAGGAAAAATCAAGAGATTTGAGTGTCTCAAACAGTTTTCAGATGAAACACTGAACCTGGTTCCACAACCTATTTTGACAAAGAAATCACTGTTGAGGTCATTTACTACAGGAACATGCAGAGAAGGAAGAACACCTCGGGCACATTTGGTGAGAAGTAGTTCTCCTCTACCTATTCCAAGAATCAGCAACAAGGAAATTGTGGAACACTTGAAAAGGATTATTTCTGACCAGTCTGGAATCCCGGTCAACAATATCTCAGTCACAGACAACATGTCAACCTATGGAATTGATTCAATTGGAGTGGTCAAAGCAACTCAAAAACTCACAGATTTCCTGGGAGTGCCAGTTGCGGCTATAGATGTTTTCACTGCATCATGCATTCAAGAATTGGCTAACTTCTCTGAGAATCTTCTACTCAAGTCTCAACCTCAACTCATGAGCAATTCACCACATGCTCCAGAAGCTGAAATTGATTTTACTGAAGTGGTTGTGGATGTATCCAAGTCTCGCCAATGGGGTATCCGTTTACTTCAACTCCTAGCACTTGTTTATATTTCTATCATGCTGGTCACTCCTGCTTATCTATCCATCACTGCTTTTCAAAGTTTCATACCAAATGCCAGTGAATCGGTATATGGAATGCCTTGGTCAAGCTATTTGATTTCTTTGACTTTGGCACCACTTTCTTGGATCCTTTGCATAGTTTCCACTTGCCTTTGCATTTCCTTTTTTGGGAATTCTTTCTTGAGGCCAAACTATGCCCTTACACCTGAAATATCCATTTATTCAATGGATTTTGTTAAGTGGTGGGCGCTCTATAAAACTCAGGAAATTTCTTCAAAAGTTTTGGCAACACACCTCAGAGGAACAGTGTTTCTGAAATACTGGTTTGAGATGCTCGGTGCAAGAATTGGATCCTTAGTTTTGCTTGACACAGTGGACATCACCGACCCATCTCTGGTTTCAATTGGAGATGAAGTTGCCATTGCAGAAGGGGTTTTGGTTCAAAGCCATGAGGTGAAGAATGGAATTCTAAGTTTCCTTCCTATTAGAATAGGTAAAAATTCTTCAATTGGACCTTATTCTATTATTCAAAAAGGAAGTATCATCAAAGAAGGATCTGAAGTACAACCCCTGCAAAAGGTTGAAGGAGGCCAACATGTACTCAAACCTGCTAAGCATAATAACGTTAAAGAGAATGCCCTGTTGCTTGTTTCTACCAGCAAAATACAGTCCAATGCCATGTACCATTTTCTGGGGATCTATCTCACTGGCTTTCTCAGCTCCCTTGCTTCAGCTATTGCTTACATCTTGTACATAAGGCTCTTCCAGATACCTGCATCATTCCAACACTTCTCATTTCTTTGTGTATGCGGTGCCTTCCACTGGATCCCATTTACCGTTGTTGCATATGCCACCATGTTTTCTGATGTCCCATCAAATCCCATTGCCTTTACCATTTCATTTACCAGCGCATATCTGCTTCATGGCCTCATACTCACCTCTCTCACTTGTGCTTTGACACGTTTGCTAAAATTCAACCAAAATCAAACCCATTTCAAAACCTGGCTTAGACATCAATTGACCATTTCCTGCCACCATAGATTTGCAAAGCTTCTCTCAGGAACAGAAGCCTTCTGCTTATATTTACGCCTTTTGGGTGCAAAAATTGGCAAACACTGTTCCATTAGAGCCATCAACCCAGTTTCTAACCCTGAGTTAATGTCAATAGGCGATGGTGTCCATCTTGGTGATTTCAGCAAGATAATCACCGGTTTTCACTATTCCAATGGATATGCTTGTGGAAAAGTAGAGGTTCAGGATAATTCAGTTGTGGGGAGTCAAAGCCTAATCCTCCCAGGTTCTGTTGTAGAAAAGAATGTCATTCTAGGTGCACTTTCAGTTGCTCCAATGAATTCTATCCTCCATGAGGGTAGCGTGTATATCGGATCTCAAACCCGAGTTGCAACCAGAAACTCTTCGTATCATTTAGATGAAAGGATAGAGGAGATGGACATGGAGTACAAAAAAGTAGTTGCAAACATGGCTGCAAATTTAGCCGTCACTACTATTAATGTCAAAGCAAGATATTTCCACCGCATTGGTGTTAGTGGAAAGGGACACTTGAAAATCTATGACAAACTTGATGGCAATATTCCACTACACAAGATTTTTTACCCTGGAAAAAGCTACCCTATCATGTTAAGACACAGTAATAGCTTGAGTGCTGATGATGATGCAAGGATTGATGCACGTGGTGCAGCTTTGAGGATTCTTTCTGATGAATCACCAGATTCTAATAACCTGCAGCATGCTTCCCTCATTGACCTGACACTAAAAACTGGCAACGCATTTTATGCTCGCACTCTTGCTGATTTTGCAACCTGGCTTGTGTGTGGACTTCCAGCGAGGGAGGAACTTGTTAAGCGCACCCCACATGTTCGTGATGCAGTGTGGAATTCCCTTAGACATGCAAACTCATACGCTGAATTGCACTACTATTCAAACATTTGCAGGCTTATGCGCTTCACTGATGGACAAGAAATGTACGTGAAGTTTAAGCTAAGACCTATTGACACAAGCATTAGTGAGGACACAGGTAAGGTTGTACCAACTGGGATTCTTCCACCAGAAACGGGTGCAATTCCTAGGGATGAAAAGGACACACGTCCTTTGCTTTTCCTTGCTCAAGATTTTCAACGCCGTGTGAATTCTCCTGGTGGAGTTTGTTATGTGTTTCAATTGCAACTCCGAGCAGTGCCAGAAGATGAAGCCGCACGTGACATTGCACTGGACTGCACCAAACCATGGGATGAAAATGAGTTCCCTTACATTGATGTTGGAGAGGTAAACATCAATGAGAATCTCTCTACGGAAGAATCAGATAGGCTTGAATTTAACCCTTATCTCAAAAGCCATGAGTTGGATGTGATCCCTGCTACTTCCAACACCCAAAGTGCTTCAATTGATCATGGCCGTTCATTGATCTATGAGATTTGCCAGCACGTTCGTAACAGACAGCCACTCCCAGAATCTTGGAGGAACCTCGTAGAGCAATCTAACGTTAAGGTAGACTTGTCTTGCTGTCCCGTGGCAGCAGCATTGCCCAAAAAGGAGACGACAAAGAAAGTTACAACAACCTTAACCTTGACAAGAACCTGGTACCAGACATTCTCAGCACTTTTCACTCAACCGTTGCTGCAAACTGTTTTGCCTTACACGGTGATGGGTTTAGCAGTTTTTGCTCCTTTGAACTTTCTTGTTAACCTTAAGAACGTTGAGAAACTCCAAGTGCAATGGTTCTTTCCTTTGTTTTGGGTTGTCTCGGGTGTCATGGCTGCACTGGCATGTGTTGTGACCAAATGGGTTCTCGTGGGAAGAAAAAAAGAGGGTGAAACCGTGCCCTTATGGAGCAAAAGGGTAATCATGGATAGCACGTGGCAAGCGATTAGAACCTTGGTTGGGGATTATTTCATGGACATGGCAAGTGGGTCGTTTTTGTTTGTGATGTGGATGAAGTTGATGGGTGCGGACATAGACATGGATGGTGGTGGGGCCTACGTGGACAGCACCGGGGCTATGTTGAACCCTGAAATGGTGACGATTGAGAGAGGGGGTTGTGTGGGAAGAGAGGCATTGCTATTTGGACACATATATGAAGGTGATGAAGGTGGAATGGTGAAGTTTGGGGGAATCAAAATTGGTGAAGATGGGTTTGTGGGAAGTAGAGCTGTGGTCATGCCTGGTGTGCATGTGGAGAATGAGGCCAATCTTTCTGCTTTGTCTCTCGCCATGAAAGGAGAAACAGTTAGGTCAAGATAA 6996 0.4228 MDPERSVEDQFSKLHPSMPVNTRIGIVGAGPSGLSVAYALVRLGYNNITVLEKHHTVGGMCESVEIEGKIYDLGGQVLAASSAPVIFHLAKETGCTLEEMNSHKLAVIDSSSGKYQDVKVADDYVSVMSLTLQIQEKVKNSGRFGVHALSEVASDLAPDYLERHGLKSVPKSVAYGYTASGYGFIQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWQRIAESIPIKLHYSTEVLAIRRNSDTVTVNVKGSNEIETMEFDKIIISGNFPLKYGRTYRSAPSTCLENETEVMDASELEKDLFSKVETNDYYTTVLKIKGLERMPVGFYYFSEYMEDPSTIGNPVAMQKFYADSNIFLFWSYGNSADIKGPTVTELAIKSIESMGGEVQNIILQRRFKYFPHVSSQDMRNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALICKNFANSSDLPVFPYTKSLFPLQTDIQKKEPKELVELPGVQFPNLPALNSYLKHWGTHPITQNRTLYTWLNEGGTVVGKRTYGEQHLNASCIAHKLLTSQKPVIKPGDRVLLVYVPGLDFVDAFFGCLRAKVLPVPVLPPDPMQRGGQALLKIENIAKSCGIVAILSTASYHTAVRAGLVKSLISLTGKNGKYTAQWPKLPWLHTDTWVNNSRNSAVEDVDDQCEPQPGDVCFLQFTSGSTGDAKGVMITHGGLVHNVKLMRSRYKSTSRTVLVSWLPQYHDMGLIGGLFTALVSGGSAVLFSPLTFIKKPLLWLETISKYQATHSAGPNFAFELVVRRLESEKDKLQSLDLSSMIFLMVAAEPVRMKTLKRFLDLTTPFGLSQKVMAPGYGLAENCVFVSCAFGEGCPILVDWQGRVCCGYIHPGDSDVDIIIVDPESGEELEEDGREGEIWISSPSAGIGYWGKEELSQKTFRNKLQNHPGRNYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSADVEKTVESSSEFLRPGCCAVIGVPEEILSAKGISLPDGSDQVGLVVVAEVRDGKTVSKDVIEHIQTRVVEEHGVSVASVKLIKPRTISKTTSGKIKRFECLKQFSDETLNLVPQPILTKKSLLRSFTTGTCREGRTPRAHLVRSSSPLPIPRISNKEIVEHLKRIISDQSGIPVNNISVTDNMSTYGIDSIGVVKATQKLTDFLGVPVAAIDVFTASCIQELANFSENLLLKSQPQLMSNSPHAPEAEIDFTEVVVDVSKSRQWGIRLLQLLALVYISIMLVTPAYLSITAFQSFIPNASESVYGMPWSSYLISLTLAPLSWILCIVSTCLCISFFGNSFLRPNYALTPEISIYSMDFVKWWALYKTQEISSKVLATHLRGTVFLKYWFEMLGARIGSLVLLDTVDITDPSLVSIGDEVAIAEGVLVQSHEVKNGILSFLPIRIGKNSSIGPYSIIQKGSIIKEGSEVQPLQKVEGGQHVLKPAKHNNVKENALLLVSTSKIQSNAMYHFLGIYLTGFLSSLASAIAYILYIRLFQIPASFQHFSFLCVCGAFHWIPFTVVAYATMFSDVPSNPIAFTISFTSAYLLHGLILTSLTCALTRLLKFNQNQTHFKTWLRHQLTISCHHRFAKLLSGTEAFCLYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSKIITGFHYSNGYACGKVEVQDNSVVGSQSLILPGSVVEKNVILGALSVAPMNSILHEGSVYIGSQTRVATRNSSYHLDERIEEMDMEYKKVVANMAANLAVTTINVKARYFHRIGVSGKGHLKIYDKLDGNIPLHKIFYPGKSYPIMLRHSNSLSADDDARIDARGAALRILSDESPDSNNLQHASLIDLTLKTGNAFYARTLADFATWLVCGLPAREELVKRTPHVRDAVWNSLRHANSYAELHYYSNICRLMRFTDGQEMYVKFKLRPIDTSISEDTGKVVPTGILPPETGAIPRDEKDTRPLLFLAQDFQRRVNSPGGVCYVFQLQLRAVPEDEAARDIALDCTKPWDENEFPYIDVGEVNINENLSTEESDRLEFNPYLKSHELDVIPATSNTQSASIDHGRSLIYEICQHVRNRQPLPESWRNLVEQSNVKVDLSCCPVAAALPKKETTKKVTTTLTLTRTWYQTFSALFTQPLLQTVLPYTVMGLAVFAPLNFLVNLKNVEKLQVQWFFPLFWVVSGVMAALACVVTKWVLVGRKKEGETVPLWSKRVIMDSTWQAIRTLVGDYFMDMASGSFLFVMWMKLMGADIDMDGGGAYVDSTGAMLNPEMVTIERGGCVGREALLFGHIYEGDEGGMVKFGGIKIGEDGFVGSRAVVMPGVHVENEANLSALSLAMKGETVRSR 2331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03060 2331 ProSitePatterns Phosphopantetheine attachment site. 1151 1166 IPR006162 -
Gma13g03060 2331 Pfam Flavin containing amine oxidoreductase 32 265 IPR002937 GO:0016491
Gma13g03060 2331 Pfam Phosphopantetheine attachment site 1128 1191 IPR009081 -
Gma13g03060 2331 Gene3D Catalase core domain 1713 2071 - -
Gma13g03060 2331 PANTHER AMP-BINDING ENZYME 1 2331 - -
Gma13g03060 2331 SUPERFAMILY Trimeric LpxA-like enzymes 1595 1729 IPR011004 -
Gma13g03060 2331 ProSiteProfiles catalase family profile. 1685 2331 IPR018028 GO:0004096|GO:0006979|GO:0020037
Gma13g03060 2331 SUPERFAMILY ACP-like 1119 1209 IPR036736 -
Gma13g03060 2331 Gene3D Hexapeptide repeat proteins 1359 1467 - -
Gma13g03060 2331 Pfam AMP-binding enzyme 525 958 IPR000873 -
Gma13g03060 2331 PRINTS Adrenodoxin reductase family signature 23 45 - -
Gma13g03060 2331 PRINTS Adrenodoxin reductase family signature 47 60 - -
Gma13g03060 2331 ProSitePatterns Putative AMP-binding domain signature. 680 691 IPR020845 -
Gma13g03060 2331 Gene3D - 23 446 IPR036188 -
Gma13g03060 2331 SUPERFAMILY Trimeric LpxA-like enzymes 2234 2324 IPR011004 -
Gma13g03060 2331 Gene3D - 481 952 IPR042099 -
Gma13g03060 2331 Gene3D Hexapeptide repeat proteins 1575 1712 - -
Gma13g03060 2331 SUPERFAMILY FAD/NAD(P)-binding domain 18 271 IPR036188 -
Gma13g03060 2331 Gene3D - 94 202 - -
Gma13g03060 2331 SUPERFAMILY Trimeric LpxA-like enzymes 1357 1434 IPR011004 -
Gma13g03060 2331 Gene3D - 303 396 - -
Gma13g03060 2331 CDD FAAL 499 1072 IPR040097 GO:0008610
Gma13g03060 2331 ProSiteProfiles Carrier protein (CP) domain profile. 1122 1196 IPR009081 -
Gma13g03060 2331 PANTHER AMINE OXIDASE 1 2331 - -
Gma13g03060 2331 SUPERFAMILY Acetyl-CoA synthetase-like 507 1079 - -
Gma13g03060 2331 Gene3D - 953 1080 IPR045851 -
Gma13g03060 2331 SUPERFAMILY Heme-dependent catalase-like 1746 2063 IPR020835 GO:0020037
Gma13g03060 2331 Gene3D - 1121 1191 IPR036736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03060 Gma-Chr13 44951213 44959077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03060 676 991 Monolignol Biosynthesis Gene Families AT1G20480 26.814 1.07e-19 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03060 - - gsj:114374875 4014.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03060 13 44951213 44959077 Gma13g03060 13 44951213 44959077 ECH
Gma13g03060 13 44951213 44959077 Gma15g00300 15 2617888 2625744 GST
Gma13g03060 13 44951213 44959077 Gma12g00485 12 4042853 4048391 PCT
Gma13g03060 13 44951213 44959077 Gma11g01185 11 10086859 10089189 PCT
Gma12g00485 12 4042853 4048391 Gma13g03060 13 44951213 44959077 PCT
Gma11g01185 11 10086859 10089189 Gma13g03060 13 44951213 44959077 PCT