Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03047 ATGGGAGCTGGTTGTTCTAAATTGTGTCTATGCTGGTGCCCCTCCAACTCCAAACCCAATCTTCATGACTTACCTGATAATGAGAATGAGAAGGAGGAGTCTTGGGTTGGCTTCACCGAGTTCACCTTGGATCAACTGAGAAGTGCCACATCGTCATTTTCACCCGACAACATAGTCTCGGAACACGGTGAGAAGGCTCCCAATGTTGTCTACAAAGGAAGGACTGAAGATGATAGGTTGGTTGCTGTGAAGCGCTTCAACAAGTCTGCTTGGCCTGATCCTCGACAGTTCCTAGAGGAAGCAAGGGCAGTGGGGCAGCTGAGGAATGAGCGGTTGGCTAACTTGGTTGGTTGTTGCTGTGAAGGGGAAGAGAGATTGCTTGTTGCTGAGTTTATGCCAAATGAAACTCTCTCCAAACATCTCTTTCACTGGGAGAGCCAGCCAATGAAATGGGCAATGAGGCTGAGAGTGGCCTTGTATTTAGCACAAGCATTGGAGTACTGCAGCAGTAAAGGAAGGGCATTGTATCATGATCTTAATGCTTATCGAGTTTTGTTTGATCAGGATGGAAACCCTAGGCTCTCTTGTTTTGGACTCATGAAAAACAGCAGAGATGGCAGAAGCTATAGTACAAATTTAGCTTTCACCCCACCTGAGTATTTGAGGACAGGAAGAATCACCCGAGAAAGTGTAATATACAGTTTTGGCACACTCTTGCTTGATCTTCTGAGTGGCAAGCATATTCCACCCAGTCATGCACTTGACCTAATACGTGGCAAAAACTTTCTGATGCTGGTGGACTCATGTTTGGAAGGTCATATTTCAAATGATGATGGAACTGAGATAGTGAGATTAGCTTCACGCTGTTTACAGTATGAACCTCGTGAGAGGCCAAACGCCAAGTCGCTTGTGACTGCTCTAGCTCCTCTTCAGAAAGAAACTTCAGTTCCATCACAAGTTTTGTTGGGCATACCAGATGAGATTACCCCATCAAAGGAAGCAGTTCCACTGACACCTTTTGGTGAAGCTTGTTCTAGAAGAGATCTCACTTCAATATATGAAATTTTGGAAACGGTGGGGTACAAGGATGATGAAGATGTAGCAAATGAGCTTTCGTTCCAAGTGTGGACAGACCAAATACAAGAAACACTAAATTCTAAGAAGCAAGGAGATTCTGCTTTCCATGCCAGAGACTTCTCTAAGGCCATTGAGTGCTATACACAAGTAAGTCAGCTAGAAATACGTGGAGCATGA 1254 0.4474 MGAGCSKLCLCWCPSNSKPNLHDLPDNENEKEESWVGFTEFTLDQLRSATSSFSPDNIVSEHGEKAPNVVYKGRTEDDRLVAVKRFNKSAWPDPRQFLEEARAVGQLRNERLANLVGCCCEGEERLLVAEFMPNETLSKHLFHWESQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRVLFDQDGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITRESVIYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLVDSCLEGHISNDDGTEIVRLASRCLQYEPRERPNAKSLVTALAPLQKETSVPSQVLLGIPDEITPSKEAVPLTPFGEACSRRDLTSIYEILETVGYKDDEDVANELSFQVWTDQIQETLNSKKQGDSAFHARDFSKAIECYTQVSQLEIRGA 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03047 417 SUPERFAMILY Protein kinase-like (PK-like) 28 312 IPR011009 -
Gma13g03047 417 Pfam Protein tyrosine and serine/threonine kinase 70 307 IPR001245 GO:0004672|GO:0006468
Gma13g03047 417 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 409 IPR045845 GO:0004672|GO:0009742
Gma13g03047 417 Gene3D Phosphorylase Kinase; domain 1 26 131 - -
Gma13g03047 417 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 1 409 - -
Gma13g03047 417 Gene3D Transferase(Phosphotransferase) domain 1 133 325 - -
Gma13g03047 417 ProSiteProfiles Protein kinase domain profile. 56 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03047 Gma-Chr13 44835143 44839383 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03047 14 310 Glycoside Hydrolase AT3G07070 31.902 1.39e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Gma13g03047 PK_Tyr_Ser-Thr 8.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03047 - - gmx:100804210 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03047 13 44835143 44839383 Gma13g03047 13 44835143 44839383 ECH