Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03040 ATGATGGTTGATAAACAACGGTACCCGACAATAGAACAAAAGCTTGCTGGCCAGCTTCACTTGAGATCCAACTCCAACCTTTCCCCACATGTTGGAACTTGTTACGAACGTCTGAAAAGACCAGCTCTGTTTCAGCAACGATTTTCACTAAAAAATCATTCAAATGCAGGGTTGCTGTGCCCTCTCGTGCCTGCATGGAAAGCCACTAGCCATCTGCATTCTGTAGGTTCAGCTGCTTCACCAGTGTTGGTCCCATCCCCATCAGAGAAAAACTTTGCAAGCTTTGCCACTGATTTTCTCATGGGTGGAGTTTCTGCTGCAGTGTCCAAGACTGCAGCTGCTCCTATTGAACGCATAAAGCTTCTGATTCAAAATCAAGATGAGATGATCAAGGCCGGTCGGCTCTCCGAACCCTACAAGGGCATTGGAGATTGCTTTGGCAGAACAACGAAAGACGAGGGGTTTGTTTCATTGTGGAGAGGGAACACTGCTAACGTTATCCGTTACTTCCCAACACAGGCCCTGAACTTTGCATTTAAAGACTACTTTAAGAAGCTATTTAACTTCAAGAAAGACAGGGATGGGTACTGGAAATGGTTTGCAGGGAACATGGCATCTGGTGCAGCAGCAGGAGCTTTATCATCGGTGTTTGTTTATTCTTTGGATTACGCTCGAACCCGCCTTGCCAATGATGCTAAAGCTGGAAAGACGGGTGGAGAGAGACAATTCAATGGTTTGGTCGATGTGTACAGGAAGACTCTTCGATCGGACGGTGTTGCTGGCCTCTACCGTGGCTTCAACGTTTCTTGTGTTGGAATCATTGTCTACCGTGGTTTGTACTTTGGAATGTATGATTCTCTGAAACCAGTACTCTTGGTAGGAACTTTGCAGGATAGTTTCTTGGCTAGCTTTGCTCTGGGGTGGATGGTTACTATTGGTGCTAGCATTGCCTCGTACCCCTTAGATACGGTTCGCAGAAGAATGATGATGACATCTGGTGAAGCTGTCAAGTACAAGAGCTCTTTCGATGCATTCTCGCAAATTGTGAAGAATGAAGGTTCAAAATCTTTGTTCAAGGGCGCGGGAGCAAACATCCTTCGTGCAGTTGCTGGTGCTGGTGTGCTTTCTGGTTATGACAAACTTCAGGTACTTGTCCTGGGAAAGAAGTATGGTTCTGGTGGGGCTTAA 1188 0.463 MMVDKQRYPTIEQKLAGQLHLRSNSNLSPHVGTCYERLKRPALFQQRFSLKNHSNAGLLCPLVPAWKATSHLHSVGSAASPVLVPSPSEKNFASFATDFLMGGVSAAVSKTAAAPIERIKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTTKDEGFVSLWRGNTANVIRYFPTQALNFAFKDYFKKLFNFKKDRDGYWKWFAGNMASGAAAGALSSVFVYSLDYARTRLANDAKAGKTGGERQFNGLVDVYRKTLRSDGVAGLYRGFNVSCVGIIVYRGLYFGMYDSLKPVLLVGTLQDSFLASFALGWMVTIGASIASYPLDTVRRRMMMTSGEAVKYKSSFDAFSQIVKNEGSKSLFKGAGANILRAVAGAGVLSGYDKLQVLVLGKKYGSGGA 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03040 395 Gene3D Mitochondrial carrier domain 96 391 IPR023395 -
Gma13g03040 395 ProSiteProfiles Solute carrier (Solcar) repeat profile. 298 384 IPR018108 -
Gma13g03040 395 SUPERFAMILY Mitochondrial carrier 91 380 IPR023395 -
Gma13g03040 395 ProSiteProfiles Solute carrier (Solcar) repeat profile. 198 290 IPR018108 -
Gma13g03040 395 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 395 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gma13g03040 395 Pfam Mitochondrial carrier protein 94 190 IPR018108 -
Gma13g03040 395 Pfam Mitochondrial carrier protein 299 385 IPR018108 -
Gma13g03040 395 Pfam Mitochondrial carrier protein 197 291 IPR018108 -
Gma13g03040 395 PANTHER ADP,ATP CARRIER PROTEIN, MITOCHONDRIAL 2 395 - -
Gma13g03040 395 PRINTS Adenine nucleotide translocator signature 95 107 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gma13g03040 395 PRINTS Adenine nucleotide translocator signature 139 160 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gma13g03040 395 PRINTS Adenine nucleotide translocator signature 172 184 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gma13g03040 395 PRINTS Adenine nucleotide translocator signature 198 211 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gma13g03040 395 PRINTS Adenine nucleotide translocator signature 303 319 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gma13g03040 395 ProSiteProfiles Solute carrier (Solcar) repeat profile. 93 186 IPR018108 -
Gma13g03040 395 PRINTS Mitochondrial carrier protein signature 98 111 IPR002067 GO:0055085
Gma13g03040 395 PRINTS Mitochondrial carrier protein signature 111 125 IPR002067 GO:0055085
Gma13g03040 395 PRINTS Mitochondrial carrier protein signature 161 181 IPR002067 GO:0055085
Gma13g03040 395 PRINTS Mitochondrial carrier protein signature 213 231 IPR002067 GO:0055085
Gma13g03040 395 PRINTS Mitochondrial carrier protein signature 263 281 IPR002067 GO:0055085
Gma13g03040 395 PRINTS Mitochondrial carrier protein signature 307 329 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03040 Gma-Chr13 44792198 44795531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03040 2 395 Antiporters AT5G13490 73.924 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03040 K05863 - gmx:100800843 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03040 13 44792198 44795531 Gma13g03040 13 44792198 44795531 ECH