Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03012 ATGATGGTGGTGACAATTGATAATAATGATGGTGGTAGCGATAACCGTGTGATGACTGCAACGGTGGTCATAATGGTGGTGACGACAGTTACACTGATGATTATGGTGGTGGAGAACCAAGTAGCGAAGGGGTTTGAGTTTGTTGATTCATCTTCCCCTTCTTCCGGCACAAGCTCAAGTGGAGAATCCATGGAGTTTACTAAGTATTCAAATCCCATCCTCAGATACATAAGCGACATCCTCATGGATGAGGAAGATGACTTGGAGCGCAGACCCTGCATGTTGCAGGATTGTTTGAGACTCCAGGCTGCTGAAAAATCCTTCCATGATGTCCTTCTCCATCAAAACCCTTCTCCTTTCCGTGATGAAAGCGTTGGCATCATACATTCTGATGAAATTTTTGGTCGCACTCCAAAAACCCCTCTAGTTGATTCCCCAGATGCAGTTCCTGATCCTCCATTTGGGGAGTCACGTCCTATTGGTTATTTTCTTGATGGAACCTGGAATCTCTTTCAGTCTCATACAAAGATGGTAGAAAAGGGTTCTTCAGCTTCAGCACTAAGAGAAAAGAGAAACCATCAGATGGATGATTATGAGTCTCATGAACAGGAAGCAAGAAAAGGCAGCAAGGTTTCAGCTGTCTTTTATGACGAGTCAGAGCCACCAGAGATCTTAGATGAGGTGCTGCTTTATCAAACCGGAAGAAGTCAACCACTCTATAGTTCTCCTACTGTGCCATCACAAACTCAAAGGGTTGATTTAGGAAGGTCCAGTGGAAAGGAAGCACGTGCACGTTCAAAGGAAGTGTCCTCCAATACTGAGACAGCTATAGATTTATGGACCCTTCTGACTCAATGTGCACAAGCAGTGGCAAACTATGACCAAAGAAATGCAAATGAATTACTCAGCCAGATTAGGCAACACTCTTCACCTTATGGGAATGGACTTCAGCGTTTGGCTCATTATTTTTCCAATGGACTTCAGATAAGATTGGCTGCTGGGACCCCATCATATATGCCTCTAGAAGTGGCAACTGCTGCTGATATGTTGAAAGCTTACAAACTATTTGTTACATCCTCTCCTTTGCAGAGGTTGACAAACTATTTGACAACCAAGTCAATCATTAGTCTTGTGAAAAATGAGAGCAGCGTCCATATTATTGACTTTGGTATTTGCTATGGTTTTCAGTGGCCGTGCCTTATCAAGAAGCTCTCAGATAGGCTTGGTGATCGTCCAAGGCTTCGTATAACAGGAATTGATCTTCCTCAGCCGGGTTTTCGGCCTAAAGAAAGGGTCGAGGAGACCGGGCGGCGTTTGAACTTGCCTGATGAGACTGTGGATGTGAAGTGTCCAAGAGATGCTGTGTTGAGGTTGATAAGGAGGATCAATCCAAACATGTTCATCCATGGGGTGGTCAATGGTACCTATAGTGCACCCTTTTTCCTTACTAGGTTCAGGGAAGCACTTCACCACTTCTCATCACTGTTTGATGTGTATGAGGCTAATGTGCCTCGTGAAGACACGCAAAGAGTGATGCTGGAGAAAAGGTTGTTTGGAAGGGATGCCATCAATGTTATAGCGTGTGAAGGGGCTGAGAGGGTTGAGAGACCGGAGACCTATAAGCAGTGGCAGGTTAGGAATCAGAGAGCTGGTTTCGAGCAAGTCCCTTTGGATCCTCAGTTAGTGGTTGATGCTACGGATATTGTGAAGAGGGAATATCACGAAGATTTTGTAGTGGCTGAGAATGACAAGTGGGTTTTGCTGGGGCGGAAAGGGCGTATTCTGAATGCCATTTCTGCATGGACTCCTGATTAA 1815 0.4496 MMVVTIDNNDGGSDNRVMTATVVIMVVTTVTLMIMVVENQVAKGFEFVDSSSPSSGTSSSGESMEFTKYSNPILRYISDILMDEEDDLERRPCMLQDCLRLQAAEKSFHDVLLHQNPSPFRDESVGIIHSDEIFGRTPKTPLVDSPDAVPDPPFGESRPIGYFLDGTWNLFQSHTKMVEKGSSASALREKRNHQMDDYESHEQEARKGSKVSAVFYDESEPPEILDEVLLYQTGRSQPLYSSPTVPSQTQRVDLGRSSGKEARARSKEVSSNTETAIDLWTLLTQCAQAVANYDQRNANELLSQIRQHSSPYGNGLQRLAHYFSNGLQIRLAAGTPSYMPLEVATAADMLKAYKLFVTSSPLQRLTNYLTTKSIISLVKNESSVHIIDFGICYGFQWPCLIKKLSDRLGDRPRLRITGIDLPQPGFRPKERVEETGRRLNLPDETVDVKCPRDAVLRLIRRINPNMFIHGVVNGTYSAPFFLTRFREALHHFSSLFDVYEANVPREDTQRVMLEKRLFGRDAINVIACEGAERVERPETYKQWQVRNQRAGFEQVPLDPQLVVDATDIVKREYHEDFVVAENDKWVLLGRKGRILNAISAWTPD 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03012 604 MobiDBLite consensus disorder prediction 237 269 - -
Gma13g03012 604 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 38 121 IPR005202 -
Gma13g03012 604 MobiDBLite consensus disorder prediction 181 213 - -
Gma13g03012 604 Coils Coil 184 204 - -
Gma13g03012 604 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 148 439 - -
Gma13g03012 604 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 148 439 IPR005202 -
Gma13g03012 604 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 440 603 IPR005202 -
Gma13g03012 604 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 38 121 - -
Gma13g03012 604 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 440 603 - -
Gma13g03012 604 MobiDBLite consensus disorder prediction 237 255 - -
Gma13g03012 604 MobiDBLite consensus disorder prediction 183 213 - -
Gma13g03012 604 ProSiteProfiles GRAS family profile. 270 602 IPR005202 -
Gma13g03012 604 Pfam GRAS domain family 441 602 IPR005202 -
Gma13g03012 604 Pfam GRAS domain family 281 440 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03012 Gma-Chr13 44589663 44593518 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03012 69 603 GRAS Transcription Factor Family AT2G29060 39.739 1.33e-130 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma13g03012 GRAS 1.3e-41 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03012 - - aprc:113855970 776.933