Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03011 ATGAATGTGGTAGCATGTGAAGCTCTTGAGAGGGTTGAGAGGCCTGAGACATACAAACAATGGCAGGCTAGGAATACTAGAGCTGGTTTTAAGCAGCTCCCACTGGATAAGGAGATAATGACCAAATTTAGGGGCAAATTAAGGGAATGGTACCACAGGGATTTTGTCTTTGATGAAGATGGAAACTGGATGCTTCAAGAATTCATACTGGATGGAAGGTCACCTTCAGCTGTTGTGAACTGTGATGAATATTCTTCCCAGTGCTGGACGACACATTTTGATCTCATGGTCATGGGGGCATGCATCTGTCGTGAAAAGGATTAA 324 0.4383 MNVVACEALERVERPETYKQWQARNTRAGFKQLPLDKEIMTKFRGKLREWYHRDFVFDEDGNWMLQEFILDGRSPSAVVNCDEYSSQCWTTHFDLMVMGACICREKD 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03011 107 ProSiteProfiles GRAS family profile. 1 85 IPR005202 -
Gma13g03011 107 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 67 IPR005202 -
Gma13g03011 107 Pfam GRAS domain family 1 65 IPR005202 -
Gma13g03011 107 PANTHER SCARECROW-LIKE PROTEIN 34 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03011 Gma-Chr13 44584336 44587924 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03011 1 90 GRAS Transcription Factor Family AT1G07520 53.846 3.25e-26 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma13g03011 GRAS 1e-11 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03011 - - cam:101504630 133.265