Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03010 ATGGATCCAAACTTTATCATTAGCGGCTACGACTTTGATGAATCAAACCACTGGGATCTTAACGGACACTACGCCAACCTTCTCAATGATGCTTTTTCCGATGTGGGCCCACTTGGTCTTTCTCAGAATGCAATTTTGAACTCGGAGCCCTTTGTTTCATCCTCTGGTTCCGCCGCCACCGACCCCGCCGCTACCACGGCGACTTTGGCTGATCCTTCACCCGAAGAAGACACTGATTTCTCAGAAACCTTCAAGTTCATTAGTCAAATTCTCTTGGAAGAGAACTTTGAGCAGAAACCGTGTATGTGTTATGACCCTCTGACCTTGCAACACACTGAGAAATCATTCTATGAGGCTCTGGAATTGGAACCATCACTTCCTCTTTCCCCTAATCAGCACCCGCTTGAGAGCCCTGATGGGAATTCTTCTAATTCCATTTCTGATTCCGCCAATTCTCATGATTTGAAGCCTTCTTCACCCAATACACCTGTTTCTGATGCTTTGCATTCTTCTTCCCACGCGCCCTCTTTTGTTGTTCCACCCCATGCTCTGAATAAAATTAATGATGGAACCGTGGATTTGGATTCTTCCGTAACCAAGCTCTTGGCTGAAAATATTTTCAGTGATACTGACTCTATGTTGCAGTTTAAAAGAGGGTTGGAGGAGGCTAGTAAGTTTCTTCCTCGGAGGCCTCAGCTTTTCACTGGGTTGGAGAGCACCGCAGTGTCTGCAGAGCCAAAGGGAAAAGGTGTAGCTCTGAAGATGGAGAATTCAATTGGGGTGAGGAGTAGAAAGAATCATGCGCGCCAAGATGAAGAAGAAGAAGAAGAAAGAAGCAACAAGCAGTCTGCTGTGTCTGCGGTTTGTGTTGAGGAGGAGAGTGAAATATCTGAAATATTTGACAGGGTGTTGCTTAGTGTTGAAAATGTGCCACTGTGTGCTGAAAAGAATGGATCAGTGGCACAAGCTGAGAAATCGAATTTGTCTGATGGAGGGAAGGTTCGATCCAAGAGGCAAGGGAGGAAGAAGGAGACGGTGGATTTGAGGACCCTTTTGATTTTGTGTGCACAAGCTGTGTCTTCCAGTGACAACAGGACTGCTAATGAACTGTTGAAGCAGATTAGGCAGCATTCTTCTGCTTTGGGTGATGCCTCGCAGAGGTTGGCTCATTATGTGGCCAATGCTCTCGAGGCTCGCTTAGTTGGTGATGGAACTGCCACCCAAATATTTTATATGAGCTACAAGAAGTTCACTACTACTGATTTCCTGAGAGCTTACCAAGTTTTCATATCTGCTTGCCCTTTCAAGAAATTTGCACATTTCTTTGCAAATAAGATGATTATGAAAACAGCTGATGGGGCAGAAACGCTTCATATTATTGACTTTGGTATCCTCTATGGTTTCCAGTGGCCAATTCTCATAAAGTTTTTATCACGCAGACCTGGAGGCCCCCCCAAGCTGCGCATCACAGGAATAGAGTATCCCCAACCTGGCTTTCGTCCGACTGAAAGAATTGAGGAGACTGGTCGTCGTCTAGCTAAGTATTGCAAGCGTTTCAATGTTCCCTTTGAGTACAAGGCCATAGCATCGCGAAACTGGGAAACCATTCAAATTGAAGACCTCAAAATTGAGCGCAATGAGCTGCTTGCTGTGAACTGTCTGGGAGGCACTGTTCCATTATTCTTCAATTTACGATATGTTTGA 1704 0.4525 MDPNFIISGYDFDESNHWDLNGHYANLLNDAFSDVGPLGLSQNAILNSEPFVSSSGSAATDPAATTATLADPSPEEDTDFSETFKFISQILLEENFEQKPCMCYDPLTLQHTEKSFYEALELEPSLPLSPNQHPLESPDGNSSNSISDSANSHDLKPSSPNTPVSDALHSSSHAPSFVVPPHALNKINDGTVDLDSSVTKLLAENIFSDTDSMLQFKRGLEEASKFLPRRPQLFTGLESTAVSAEPKGKGVALKMENSIGVRSRKNHARQDEEEEEERSNKQSAVSAVCVEEESEISEIFDRVLLSVENVPLCAEKNGSVAQAEKSNLSDGGKVRSKRQGRKKETVDLRTLLILCAQAVSSSDNRTANELLKQIRQHSSALGDASQRLAHYVANALEARLVGDGTATQIFYMSYKKFTTTDFLRAYQVFISACPFKKFAHFFANKMIMKTADGAETLHIIDFGILYGFQWPILIKFLSRRPGGPPKLRITGIEYPQPGFRPTERIEETGRRLAKYCKRFNVPFEYKAIASRNWETIQIEDLKIERNELLAVNCLGGTVPLFFNLRYV 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03010 567 MobiDBLite consensus disorder prediction 257 283 - -
Gma13g03010 567 ProSiteProfiles GRAS family profile. 339 567 IPR005202 -
Gma13g03010 567 MobiDBLite consensus disorder prediction 130 172 - -
Gma13g03010 567 Pfam GRAS domain family 348 554 IPR005202 -
Gma13g03010 567 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 42 554 IPR005202 -
Gma13g03010 567 MobiDBLite consensus disorder prediction 54 78 - -
Gma13g03010 567 MobiDBLite consensus disorder prediction 260 281 - -
Gma13g03010 567 MobiDBLite consensus disorder prediction 321 341 - -
Gma13g03010 567 PANTHER SCARECROW-LIKE PROTEIN 34 42 554 - -
Gma13g03010 567 MobiDBLite consensus disorder prediction 125 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03010 Gma-Chr13 44582413 44584268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03010 83 554 GRAS Transcription Factor Family AT1G07530 45.714 5.54e-127 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma13g03010 GRAS 3.2e-63 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03010 - - aprc:113855970 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03010 13 44582413 44584268 Gma15g00353 15 2995010 2996868 GST
Gma13g03010 13 44582413 44584268 Gma12g00551 12 4613052 4615756 PCT
Gma13g03010 13 44582413 44584268 Gma11g01253 11 10677537 10680643 PCT
Gma12g00550 12 4606638 4608976 Gma13g03010 13 44582413 44584268 PCT
Gma11g01251 11 10663919 10671722 Gma13g03010 13 44582413 44584268 PCT