Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03008 ATGATGAATGCTACTAATGATGAAGAGTCTTGCTTGGACAAGAGTGTCCTGAGCTACATAAAGCAAATGCTGATGGAAGACGACACCGAGGAGAGGTACAGTATGTTCCATGATTCCTTAGCCCTCCAACACACTGAGAGATCATTTTTGGAGGCTATCAATCACAACTATCCTTCTCCTTCTTATTCTTCTTCCACACACTATCATCTTGACAACTACCCCAGCGTGGACAGCCCTGAGCCATGTCTCTCTGCTTGCTCCGCTGATAACATTACTTTTAGCGCTTCCAGTAGTTGCGCTAGTAACAATACTACCAGCTCCTCTGAGTTTCCCTTGAGAAGCCTTTACCCTCTACTTCCTGACACTACTGATGAATTTGTTTTCCACTCAAATTCAACCCAATCTACCATCAATACTCCCTTTGGATTCTTCGACAATCCCCTCGCTGAAATTTTTGAGAGACGTGTAGACCTAGGTACTCTGTTCCTTCCTGCCAACACACCTTTTTCCTCTTCTTTCACAAAGGTTCCTCATGTTGTAATTAAGACAGAAGCAGAAGAAGGAGATCATTTTCTGACAGGAAGGAAACAAAGGGAGCGGGAAGAGTATGAAGCTGCAGATGGGAGAAGCAGGAAGCAATCAGCAGCACATATGGACGAGAGTGAGCTATCCGAATTGTTTGATAAAGTGGTTCTAGGCACTGACTTAAGAAAACGGGTACCTCCTAACACAACCCATAAAACAACAATATTAACAAACATGTTGTATGGTGGAGATGTCTGGGAAAATGATGACCAAGTTGTGGATCTGAGGACACTGTTGATGCTATGTGCACAAGCCATTGCTTCTGATAATCCTTCATCTGCTAAGCAGTTGGTAAAACAGATTATGCAGCATTCTTCTCCAACATGCAATGAGACTCAGAGGCTTGCACATTACTTTGGAAATGCACTTGAAGCACGCTTGGATGGAACAGGCTACAAGGTTTGTAGTGCTCTATCATCCAAAAGAACCTCTGCCAAAGACATGATAAAAGCTTACCATGTATACGCTTCAGTGTGCCCCTTTGAAAAGCTAGCAATCATTTTTGCCAACAATTCAATTTGGAATCCAAGTGTGGATGCAAAAGCAATTCACATCATAGACTTTGGCATCCGCTATGGCTTCAAATGGCCTGCACTTATCAGCCGTCTATCAAGACGTTCTGGTGGGCCACCCAAGCTACGAATCACGGGGATAGATGTGCCACAACCTGGTTTAAGGCCACAAGAGAGGGTGCTCGAGACAGGGCGTAGACTTGCAAATTTTTGCAAGCGTTTCAATGTTCCATTTGAGTTCAATGCTATTGCACAGAGATGGGACACCATCAGAGTTGAAGACCTCAAGATAGAGCCAAACGAATTTGTAGCTGTGAACTGCTTGTTTCAGTTTGAGCATCTGCTTGACGAGACAGTGGTGTTGAATAATTCCAGGGATGCTGTTCTGAGGTTGATTAAGAATGCAAATCCAGACATATTTGTGCATGGCATTGTCAACGGATCCTATGATGTACCATTCTTTGTGTCACGGTTCCGGGAGGCTCTCTTTCATTACACTGCATTGTTTGACATGCTTGACACCAACGTTGCTCGTCAAGATCCCATGAGGTTGATGTTTGAGAAGGAGTTGTTTGGACGGGAGATAGTGAACATCATAGCTTGCGAAGGTTTTGAGAGGGTTGAGAGACCACAAACATACAAGCAATGGCAGCTTCGGAACATGAGAAATGGGTTTAGGCTGCTTCCTCTGGATCATCGAATCATTGGCAAATTAAAGGATAGGTTGAGAGATGATGCGCACAACAATAATTTCTTGCTTGAGGTTGATGGCGACTGGGTGCTACAAGGTTGGAAGGGTCGAATTCTATATGCTTCCTCTTGTTGGGTACCTGCATAG 1935 0.4408 MMNATNDEESCLDKSVLSYIKQMLMEDDTEERYSMFHDSLALQHTERSFLEAINHNYPSPSYSSSTHYHLDNYPSVDSPEPCLSACSADNITFSASSSCASNNTTSSSEFPLRSLYPLLPDTTDEFVFHSNSTQSTINTPFGFFDNPLAEIFERRVDLGTLFLPANTPFSSSFTKVPHVVIKTEAEEGDHFLTGRKQREREEYEAADGRSRKQSAAHMDESELSELFDKVVLGTDLRKRVPPNTTHKTTILTNMLYGGDVWENDDQVVDLRTLLMLCAQAIASDNPSSAKQLVKQIMQHSSPTCNETQRLAHYFGNALEARLDGTGYKVCSALSSKRTSAKDMIKAYHVYASVCPFEKLAIIFANNSIWNPSVDAKAIHIIDFGIRYGFKWPALISRLSRRSGGPPKLRITGIDVPQPGLRPQERVLETGRRLANFCKRFNVPFEFNAIAQRWDTIRVEDLKIEPNEFVAVNCLFQFEHLLDETVVLNNSRDAVLRLIKNANPDIFVHGIVNGSYDVPFFVSRFREALFHYTALFDMLDTNVARQDPMRLMFEKELFGREIVNIIACEGFERVERPQTYKQWQLRNMRNGFRLLPLDHRIIGKLKDRLRDDAHNNNFLLEVDGDWVLQGWKGRILYASSCWVPA 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03008 644 ProSiteProfiles GRAS family profile. 261 642 IPR005202 -
Gma13g03008 644 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 12 643 - -
Gma13g03008 644 Pfam GRAS domain family 270 641 IPR005202 -
Gma13g03008 644 MobiDBLite consensus disorder prediction 193 220 - -
Gma13g03008 644 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 12 643 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03008 Gma-Chr13 44568743 44571051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03008 16 644 GRAS Transcription Factor Family AT1G07530 46.889 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma13g03008 GRAS 4.7e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03008 - - gmx:100793066 1286.94