Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02998 ATGGGAAAGGACTTGGTTTCTTCTGACCAGACCACTGTTCAAATTCAGGACAATAATCCAGGATGCATGTGGGGCATGCTTCAAATTCTTGATTACCATCGTTGGCGCGTAAAAAAGGTGTTTCCTCACAAAAGGAGAAAACATGCCACATATAAGAGAAAACCCATTTTGTATGACCAACATGAAGACCAACAACATGGAGTTACAGAAGCAGAATCCCTCCTTGTCGGGCAACATAGCGAAAAATTGCATGCTGCAGGCAGAAGTTCTCCCAAGAATCGCAAAAAGGAACCATGCACTGAGAAAAAGGTTAACAACGAAAACTCCAAAGGCGGTAGAACCATGGACTACTCAAGGAAAAACCAAGCCAGTAATGAGTATGCACTTCATCTGGAGAAAGATGGCAAGACAACAGAAGATGACCTTAACCATAAGCCTATGGAAACAAACAAGCATAACAGAAACATTTCCAATAAATTTGAGAAACATACTGATGTTTTCGAGTTACTTAGAGTGGAGAAGGATTTATTACTCAAATTTCTTCGAGACACAGACTTTGGTGGGAAAAAAGTCCAACAAGCATCCCACATCAATGCAAGATTGACAAAATCTGGGTCATTTCCTTTAGCCTCAACTTCACAGATGAGAAACATAAGCTCTAGGTCCTTAAAACACAAGCAAAACGAAATTTGGGCCCTTCCAAAGGGAGAAAAGTTGCATGCTGGTACTCAAGAATCAAACATGTCAGTGTCCAGTTCTGTGAAAGATAATTCTTATGAGAATCCAATGCCTTTAGCGAGTGATCTTGGTGTGGATAGTACCATGAAACAAAAAGCATTCTTTTCTTTAAGGCCTTCTCAGGGATCAAATCACAAAGGTTGGAATCAAGCGGTTCTTCATCATTTCAAAGTTATAAAACAGAAGATAAAACATGCTCTTGTGGAATTCAGAAAAAGCGGTTGCCAAGCTACTTCTGCTGAAGCAATTCACCATAGGGATTCACCTGAATATAGCATGAACAAAAATGAGGAAGAGATCTCACAAAGCTTAGAAGATGGTGTGGTTCAACAATTCAAAAGAAGTAAAAGCTCAAATGAAACTAGAGCTTCTGATTATGATTCCAACAAGCATGATGCTCGCCTCATGCGAAGAACATCCTCTCTGAATGAATCGTTGGATAGATATACTCAGTTGTTTGAGAAAAGCTTCAGCGAAGACACTAAGTGGCAAAGCTCAAAGTCTAAAAGCTTAAAATTGACAAACGAGGATAAGATCCACAAGAATGGGCACACTCCTAGGTTTTCAAGAAGCAATTTGTCTATGCCTAATCTCGAGACTTTAGGCTTCATTCTACAAGATGCACTTTTTGATACAAATGATATAGGGAATAAAGTGGAAGCTTATAATCGTGTTCATAGAAAATCAGTGAGTCTTCCTTTGAAGATAGACAGGTCACTTGATCATTTTAAAGAGGCTGAAATTGTGGAAACAGTAGAAGGGAGTGAGAGAGATGTAAATCCCAATCTTTTATCAGATAAGATTATGGAGAAAATTGATGAAGAAGTTACCTGTGACCAGAAGGAGGACATGAATGAGCCAGCGGTGGGAGATGGAAGTTTTCCCGAAGAAAAAGAGGAAATGAGTAATATGACTACCTATCTTCGCAAGGAGGTGATGGCAACTCTTGAAACTAGCTTTGAGGACACTAAAACCAGCCATGAAGGTACAAAATTGAATTCACTAAGATCTACATTGGACGAATTAGAGACTGATCTATCATATTCATCTGACAGAAATGCTAGTGTGACAGCTGAAGACACAGACAACACTTCCGATTTCAAATATGTGAAAAATATTCTTGAATTTTCGGGCTACTTGAGAAATGAGCACACTCAGATGCCATACACAGTAGACCAGCCGCTAAAGCCCTCCATATTCAAAGATTTGGATGCAACTTTGCGCCATGAAATTGAACCCTCTGAAGAAGAGACAATCAACCACCAGCTTCTTTTTAACTTAGTTAACGAGGTGCTGCTTGAAATATATGGAAGGTCTCCAACTTACTTCCCAAGACCATTCTCATTCAACCCCCGCCTCCATTCAATGCCTAAAGGGAACTATCTTCTGAATGAAGTATGGAATAGTGTTAATTCATACCTGAACTTGAAACCTGAGCTAGATCAGACACTAGACGATGTTGTCGGTCGTGATTTGGCAAAAGGAAAAGGCTGGATGATCCTTCAAGAGGAAGAGGAGTATGTAGCACTTGAATTAGAGGAAATGATCATGGATGAGTTGTTAGATGAATTTATCTTCTCATGA 2322 0.3958 MGKDLVSSDQTTVQIQDNNPGCMWGMLQILDYHRWRVKKVFPHKRRKHATYKRKPILYDQHEDQQHGVTEAESLLVGQHSEKLHAAGRSSPKNRKKEPCTEKKVNNENSKGGRTMDYSRKNQASNEYALHLEKDGKTTEDDLNHKPMETNKHNRNISNKFEKHTDVFELLRVEKDLLLKFLRDTDFGGKKVQQASHINARLTKSGSFPLASTSQMRNISSRSLKHKQNEIWALPKGEKLHAGTQESNMSVSSSVKDNSYENPMPLASDLGVDSTMKQKAFFSLRPSQGSNHKGWNQAVLHHFKVIKQKIKHALVEFRKSGCQATSAEAIHHRDSPEYSMNKNEEEISQSLEDGVVQQFKRSKSSNETRASDYDSNKHDARLMRRTSSLNESLDRYTQLFEKSFSEDTKWQSSKSKSLKLTNEDKIHKNGHTPRFSRSNLSMPNLETLGFILQDALFDTNDIGNKVEAYNRVHRKSVSLPLKIDRSLDHFKEAEIVETVEGSERDVNPNLLSDKIMEKIDEEVTCDQKEDMNEPAVGDGSFPEEKEEMSNMTTYLRKEVMATLETSFEDTKTSHEGTKLNSLRSTLDELETDLSYSSDRNASVTAEDTDNTSDFKYVKNILEFSGYLRNEHTQMPYTVDQPLKPSIFKDLDATLRHEIEPSEEETINHQLLFNLVNEVLLEIYGRSPTYFPRPFSFNPRLHSMPKGNYLLNEVWNSVNSYLNLKPELDQTLDDVVGRDLAKGKGWMILQEEEEYVALELEEMIMDELLDEFIFS 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02998 773 MobiDBLite consensus disorder prediction 85 109 - -
Gma13g02998 773 MobiDBLite consensus disorder prediction 237 258 - -
Gma13g02998 773 Pfam Domain of unknown function (DUF4378) 612 769 IPR025486 -
Gma13g02998 773 MobiDBLite consensus disorder prediction 83 117 - -
Gma13g02998 773 PANTHER PROTEIN TRM32 1 773 IPR044257 -
Gma13g02998 773 MobiDBLite consensus disorder prediction 356 379 - -
Gma13g02998 773 MobiDBLite consensus disorder prediction 242 258 - -
Gma13g02998 773 PANTHER PROTEIN TRM32 1 773 - -
Gma13g02998 773 MobiDBLite consensus disorder prediction 329 348 - -
Gma13g02998 773 MobiDBLite consensus disorder prediction 364 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02998 Gma-Chr13 44474445 44477903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02998 286 763 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 29.091 5.77e-38 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02998 - - gmx:100788333 1479.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02998 13 44474445 44477903 Gma13g02998 13 44474445 44477903 ECH
Gma13g02998 13 44474445 44477903 Gma15g00366 15 3098035 3101564 GST