Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02959 atgttcaggacgctcgacttgtacgaagcgatatccgacaaccggctacaaatcgagtccatcttctcgtcggaatcaacttcctccatcaacttcgaagccgcaattcagaaggaatcttccaagattccggtgcctggcggcgggatccacccgctcacgcgctacgtaatgaactacattgagttcctcgccgattacagggactgcgtcgccgagattgtcgccgattggcctcaaaattcgttgccggagtcttattactgcagtccggatcgcgagggaatgaatcgttcagcagagatagctgaacggatggcatggttgatattagtgctactctgcaagCTCGACGGAAAAGCTGAACTCTACAAGGAAGTTGCACTCTCTTACTTGTTTCTGGCGAATAACATGCAATACGTCGTCGTAAaggtccgcaactcaaaaaacctagggttcatcgtcggggaggattggttgacgaagcacgaattgaaggtgaaagagtacgtttgcaagtacgagcgcgtgggatggagcaaggtttttCTGTCGCTGCCGGAAAATCCGACGGCGGAGCAGGCTAGGGCGATCTACGAGTGTTTGGACGCCGAATTCCATGAAACGTGCAAGGCACAGTCCTCCTGGATCGTACCCGACCCGAAACTGCGAGAGGAAATGAAAGATTCGATAGCTTCTAAACTGGTTCCAAGGTACAGGGAATTCTTCGGGAAGTATCGGGTCGGGTTGGGAACTGATTTCGGGCTTACACCCGATGATTTGGAACATAACCTTTCTGATATTTTATCGGGTAGCGTTTCGTCGTCGCATACTCCTTCTCCTCCGCATCGCTTCAAACGACCGTGA 867 0.2318 MFRTLDLYEAISDNRLQIESIFSSESTSSINFEAAIQKESSKIPVPGGGIHPLTRYVMNYIEFLADYRDCVAEIVADWPQNSLPESYYCSPDREGMNRSAEIAERMAWLILVLLCKLDGKAELYKEVALSYLFLANNMQYVVVKVRNSKNLGFIVGEDWLTKHELKVKEYVCKYERVGWSKVFLSLPENPTAEQARAIYECLDAEFHETCKAQSSWIVPDPKLREEMKDSIASKLVPRYREFFGKYRVGLGTDFGLTPDDLEHNLSDILSGSVSSSHTPSPPHRFKRP 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02959 288 Pfam Exo70 exocyst complex subunit 1 266 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gma13g02959 288 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 276 - -
Gma13g02959 288 SUPERFAMILY Cullin repeat-like 2 267 IPR016159 -
Gma13g02959 288 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 276 IPR004140 GO:0000145|GO:0006887
Gma13g02959 288 Gene3D Exocyst complex component Exo70 1 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02959 Gma-Chr13 44172142 44173008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02959 1 272 EXO70 exocyst subunit family AT5G59730 44.337 3.23e-78 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02959 K07195 - gmx:100780298 560.451