Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02919 ATGTCCGTCATCGACATTCTCTTCCGCGTGGACGACATATGCCACAAATATGAGAAATACGACATCGATAAGCAGCGCGAGCTCAATGCCTATGGCGATGATCTCTTCGCTCGCCTCTACGCCGCTGTTGATTCCAGCATTCAATCTGCTCTCAATAAATCGGAGGTTGCCTCCACGGAGAAGAACAGGGCTTCTGCTGCGGCTTTGAATGCAGAGGTTCGTCGAACCAAAGGTAGACTCATGGACGAGCTTCCTAAACTCCGCAAATTGATGCACAAGAAGGTTAAAGGTCTCACAAAAGAGGACATGGCCGTTCGACAGGATCTTGTTCTGGCATTGCCAGAGAGAATCCAAGCAATACCAGATGGTATTTCTGGTGCTGCTGTTCAAACTGCAGGATGGACCGCTACCTCATCTCAGCCGCATATCAAGTTTGATTCATCAGAGGGACATCTTAGCAGTGATTATTTCCAGCAAAGTGAAGAATCCAGTCAGTTTCGACAAGAGTATGAGATGCGCAGGACGAAACAGGATGAAGGACTTGATATCATATCAGAGGGATTGGATACCTTGAAGGATCTGGCACATGAAATGAATGAGGAAATTGATCGGCAAGTTCCCTTAATGGATGAAATTGACACAAAGGTGGATAGAGCAGCAGCTGATGTCAGAAACACAAACGTAAGGCTGAAGAAAACTCTCACCGAGATAAGGTCTAGTCGAAATTTCTGCATCGACATTGTTCTGCTCTGTGTTCTTCTTGGAATCTTTTTGTATTTATACAATGCTATGAGGTGA 798 0.4549 MSVIDILFRVDDICHKYEKYDIDKQRELNAYGDDLFARLYAAVDSSIQSALNKSEVASTEKNRASAAALNAEVRRTKGRLMDELPKLRKLMHKKVKGLTKEDMAVRQDLVLALPERIQAIPDGISGAAVQTAGWTATSSQPHIKFDSSEGHLSSDYFQQSEESSQFRQEYEMRRTKQDEGLDIISEGLDTLKDLAHEMNEEIDRQVPLMDEIDTKVDRAAADVRNTNVRLKKTLTEIRSSRNFCIDIVLLCVLLGIFLYLYNAMR 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02919 265 ProSitePatterns Syntaxin / epimorphin family signature. 177 216 IPR006012 GO:0005484|GO:0006886|GO:0016020
Gma13g02919 265 PANTHER SYNTAXIN-72 1 262 - -
Gma13g02919 265 Gene3D - 171 232 - -
Gma13g02919 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Gma13g02919 265 SMART tSNARE_6 166 233 IPR000727 -
Gma13g02919 265 CDD SNARE_Qc 176 232 - -
Gma13g02919 265 Pfam SNARE domain 208 258 IPR000727 -
Gma13g02919 265 PANTHER SYNTAXIN 1 262 IPR045242 -
Gma13g02919 265 SUPERFAMILY SNARE fusion complex 164 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02919 Gma-Chr13 43751757 43754673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02919 1 265 SNARE and Associated Proteins AT3G09740 65.543 3.20e-133 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02919 K08506 - gmx:100817729 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02919 13 43751757 43754673 Gma13g02919 13 43751757 43754673 ECH
Gma13g02919 13 43751757 43754673 Gma12g01617 12 36176153 36179322 GST