Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02913 ATGAGAGCGACACAGATTGTGTTGGTTCTGTTTTGGTTGCTCTGCATTCACAGTCCCACGTTGTTCTGCGCCAATGTGGAGTATGATCATCGAGCATTAGTCATCGACGGCAAGCGCAGGGTCTTGATCTCTGGTTCCATCCATTACCCTCGTAGTACTCCAGAGATGTGGCCAGACCTTATTCAGAAATCCAAAGATGGAGGATTGGATGTGATTGAGACTTATGTTTTCTGGAATTTAAACGAACCAGTTCGAGGCCAGTATGATTTTGATGGGAGGAAGGACTTGGTGAAATTTGTGAAGACAGTGGCTGCAGCGGGTCTATATGTGCATCTCCGCATTGGTCCATACGTGTGTGCCGAATGGAACTATGGTGGTTTCCCTCTTTGGCTACACTTCATTCCGGGAATCAAGTTCCGAACTGACAATGAACCCTTCAAGGCAGAAATGAAGCGATTCACTGCCAAAATTGTGGATATGATCAAGGAAGAGAATCTATATGCCTCACAGGGAGGACCTGTTATATTATCTCAGATTGAAAATGAATATGGAAACATTGATTCGGCCTATGGTGCTGCGGGTAAATCCTACATCAAGTGGGCAGCAACTATGGCTACATCTCTTGATACAGGGGTTCCATGGGTCATGTGTCAGCAAGCTGATGCTCCTGATCCAATTATTAATACATGCAATGGATTTTACTGCGATCAATTTACACCAAACTCTAACACAAAACCAAAAATGTGGACTGAGAATTGGAGTGGATGGTTTCTTCCGTTCGGTGGTGCTGTTCCTTACCGGCCTGTGGAAGATCTTGCATTTGCCGTGGCACGATTTTTCCAGCGAGGAGGAACATTTCAAAATTACTATATGTACCATGGAGGGACCAACTTTGACCGAACTTCTGGTGGACCTTTCATTGCTACAAGTTATGATTATGATGCACCAATTGATGAGTATGGAATTATTAGACAGCCTAAGTGGGGCCACCTTAAAGAAGTTCATAAGGCCATAAAGCTTTGTGAAGAAGCATTGATAGCTACTGATCCAACAATTACATCCCTTGGTCCAAACCTAGAGGCGGCAGTTTACAAGACAGGATCTGTATGTGCGGCCTTCCTTGCTAACGTAGACACCAAATCTGATGTAACAGTAAACTTTAGTGGCAATTCATATCACTTGCCTGCATGGTCTGTGAGCATCTTACCAGACTGCAAGAATGTAGTGCTTAATACTGCAAAGATTAATTCTGCATCTGCAATTTCAAGCTTCACAACTGAATCTTTAAAAGAAGATATCGGTTCTTCAGAAGCTTCTAGTACAGGATGGAGTTGGATAAGTGAACCAGTGGGTATTTCAAAGGCTGATTCATTCCCACAAACTGGATTACTGGAGCAAATAAATACAACAGCTGATAAAAGTGATTACTTGTGGTACTCATTAAGCATTGATTATAAGGGTGATGCTGGTTCTCAAACTGTCCTTCACATTGAATCACTTGGTCATGCCCTTCATGCTTTTATTAATGGGAAGCTTGCAGGGAGTCAAACAGGCAATAGTGGCAAATATAAGTTCACTGTGGACATCCCTGTCACACTAGTGGCCGGAAAGAACACAATTGATCTCTTGAGTTTAACCGTGGGACTTCAGAACTATGGAGCCTTTTTTGACACATGGGGAGCGGGGATCACTGGTCCAGTGATATTGAAAGGTTTGGCAAATGGCAACACACTTGATCTCTCCTACCAGAAGTGGACTTATCAGGTTGGCCTCAAAGGGGAAGACTTAGGTCTGTCTAGTGGAagttctggacagtggaattcacaatctaccttccctaagaaccaaccattgatttggtacaagacaacctttgctgctccatccggcagtgatccagttgcaattgacttcacggggatgggaaaaGGTGAGGCTTGGGTGAATGGGCAAAGCATCGGACGATACTGGCCTACATATGTGGCTTCAGATGCTGGTTGCACGGACTCATGCAATTATAGAGGACCTTACAGTGCATCCAAATGTCGCAGGAATTGTGGAAAGCCATCACAGACACTATACCATGTACCGCGATCGTGGTTAAAACCAAGTGGCAACATTCTTGTATTGTTTGAGGAAAAGGGAGGTGATCCAACACAAATATCTTTTGTCACAAAACAGACAGAAAGTTTGTGTGCACATGTATCCGATTCTCACCCACCACCCGTAGACTTGTGGAACTCAGATACAGAATCAGGAAGAAAAGTAGGTCCTGTGCTATCACTCACTTGCCCTCATGATAACCAAGTCATCTCTTCCATTAAATTTGCTAGCTATGGAACACCCCTTGGAACCTGTGGTAACTTCTACCACGGACGCTGCAGCAGCAACAAGGCTCTTTCTATTGTGCAGAAGGCCTGCATTGGATCAAGCAGTTGTAGTGTTGGAGTATCAAGTGAGACATTCGGAAACCCTTGTAGAGGAGTGGCAAAAAGTTTAGCAGTTGAAGCTACTTGGTTTTTCTGCATTCCGATTACCCATCCCACCGCATTCACAATCACAATTGCAATAGGGTTTTCGTTTCCTTCGGCTTGCTTCTGTGGCTCTCGGAGCCGCAGAGATAGGGTTCTTCCATTTTGTCATGTTCCCCAAGGAAAAAGAGAGAGAGAGGGGTCAACGAATTTTTTGGTGGGCTTGAGGCCCTTCCGTTCCTCTCGTATCAGCTATTTGCAGGGTCAGCAGAGAGAAGAGAAGTTAGTTATTAGGATATATATTGGCTTTGGCCGTTTGAGGGTGAGTCAGATTGATGCTGTGATGGGAGATTATAAGAGTTTTTCATTTTCCAAAATGATGGGCTGCTGTGGTTGCTTCGGATTTGTCCAAAAACCAAGACGACGGCGTCGGGATAAACGTGGCATCAGTAATCTTCTCTCCCAGGGGCTATTATTGGATGGAGAAACTGAAGGCGATGAGACATATAGTGGTGACGTTACTAGTAACTGCACCAGTGTAGATGACAATGAGGTGCAAGCTGTACGCAACCGTTCAGAGGATATTTTAAACTTTAGAGCTAAGAATGGCATGGTTTGCAGGCCGTTTCCTGTTAAGGAGACTTGCAAACTTGATCGCTCAGAGGATGAAAATGGGAACAAGATGATAAATGGATATGTTCGAGAGTATAAAATTGGTTCTGGAAGCTATGGCAAAGTGGCTCTTTATCGAAGTAGTGTTGATGGAAAGCATTACGCAATTAAGTCCTTTCACAAGTCTCAATTACAAAAGCTTCGAGTTGCACCGTCTGAGACTGCTATGACTGATGTTCTACGTGAGGTATTGATTATGAAAATGGTGGAACATCCTAATATAGTCAATCTCATTGAGGTGATTGATGATCCAGAGTCGGATGACTTCTACATGGTACTTGAATATGTGGAAAGCAAATGGGTGTGTGAGGGTACAGGTCGTCCTTGTGCATTAGGTGAAGAGACTGCTAGGAAATACTTGCGCGATATAGTCTCAGGATTAACATATCTCCATGCTCATAATATAGTGCATGGGGATATAAAACCTGATAATCTGTTGATTACTCATCATGGCACTGTAAAGATAGGGGATTTCAGTGTCAGCCAGGCATTTGAGGATGGCAATGATGAACTCCGTCGATCACCTGGCACTCCAGTTTTCACTGCACCAGAATGTTGTTTAGGTCTTACTTATCATGGTAAAGCTTCTGACACGTGGGCAGTAGGAGTTACTTTGTACTGTATGATATTGGGTGAATACCCATTTCTTGGAGACACACTTCAAGACACATATGACAAAATAGTCAATGATCCTTTAGTTCTGCCAGATGACATTAACCCCCAGTTGAAGAATTTAATAGAAGGATTACTATGCAAAGACCCAGAACTGAGGATGACATTGGGCGATGTTGCTGAGCATATCTGGGTTATTGGAGAAGATGGGCCTATTCCTGGGTACTTATGTTGGTGCAAACGCAAGAGCATGGTGACTGAAGACTCTGATGGGAGCGATATACTTGCTTGA 4047 0.4233 MRATQIVLVLFWLLCIHSPTLFCANVEYDHRALVIDGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLNEPVRGQYDFDGRKDLVKFVKTVAAAGLYVHLRIGPYVCAEWNYGGFPLWLHFIPGIKFRTDNEPFKAEMKRFTAKIVDMIKEENLYASQGGPVILSQIENEYGNIDSAYGAAGKSYIKWAATMATSLDTGVPWVMCQQADAPDPIINTCNGFYCDQFTPNSNTKPKMWTENWSGWFLPFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFIATSYDYDAPIDEYGIIRQPKWGHLKEVHKAIKLCEEALIATDPTITSLGPNLEAAVYKTGSVCAAFLANVDTKSDVTVNFSGNSYHLPAWSVSILPDCKNVVLNTAKINSASAISSFTTESLKEDIGSSEASSTGWSWISEPVGISKADSFPQTGLLEQINTTADKSDYLWYSLSIDYKGDAGSQTVLHIESLGHALHAFINGKLAGSQTGNSGKYKFTVDIPVTLVAGKNTIDLLSLTVGLQNYGAFFDTWGAGITGPVILKGLANGNTLDLSYQKWTYQVGLKGEDLGLSSGSSGQWNSQSTFPKNQPLIWYKTTFAAPSGSDPVAIDFTGMGKGEAWVNGQSIGRYWPTYVASDAGCTDSCNYRGPYSASKCRRNCGKPSQTLYHVPRSWLKPSGNILVLFEEKGGDPTQISFVTKQTESLCAHVSDSHPPPVDLWNSDTESGRKVGPVLSLTCPHDNQVISSIKFASYGTPLGTCGNFYHGRCSSNKALSIVQKACIGSSSCSVGVSSETFGNPCRGVAKSLAVEATWFFCIPITHPTAFTITIAIGFSFPSACFCGSRSRRDRVLPFCHVPQGKREREGSTNFLVGLRPFRSSRISYLQGQQREEKLVIRIYIGFGRLRVSQIDAVMGDYKSFSFSKMMGCCGCFGFVQKPRRRRRDKRGISNLLSQGLLLDGETEGDETYSGDVTSNCTSVDDNEVQAVRNRSEDILNFRAKNGMVCRPFPVKETCKLDRSEDENGNKMINGYVREYKIGSGSYGKVALYRSSVDGKHYAIKSFHKSQLQKLRVAPSETAMTDVLREVLIMKMVEHPNIVNLIEVIDDPESDDFYMVLEYVESKWVCEGTGRPCALGEETARKYLRDIVSGLTYLHAHNIVHGDIKPDNLLITHHGTVKIGDFSVSQAFEDGNDELRRSPGTPVFTAPECCLGLTYHGKASDTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNDPLVLPDDINPQLKNLIEGLLCKDPELRMTLGDVAEHIWVIGEDGPIPGYLCWCKRKSMVTEDSDGSDILA 1348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02913 1348 SUPERFAMILY Galactose-binding domain-like 399 572 IPR008979 -
Gma13g02913 1348 PRINTS Glycosyl hydrolase family 35 signature 248 263 IPR001944 GO:0004553|GO:0005975
Gma13g02913 1348 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Gma13g02913 1348 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Gma13g02913 1348 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
Gma13g02913 1348 PRINTS Glycosyl hydrolase family 35 signature 285 300 IPR001944 GO:0004553|GO:0005975
Gma13g02913 1348 PRINTS Glycosyl hydrolase family 35 signature 616 630 IPR001944 GO:0004553|GO:0005975
Gma13g02913 1348 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Gma13g02913 1348 PRINTS Glycosyl hydrolase family 35 signature 643 659 IPR001944 GO:0004553|GO:0005975
Gma13g02913 1348 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Gma13g02913 1348 CDD STKc_LKB1_CaMKK 1062 1317 - -
Gma13g02913 1348 Gene3D Transferase(Phosphotransferase) domain 1 1155 1323 - -
Gma13g02913 1348 ProSiteProfiles SUEL-type lectin domain profile. 754 837 IPR000922 GO:0030246
Gma13g02913 1348 Gene3D Glycosidases 21 341 - -
Gma13g02913 1348 ProSitePatterns Protein kinases ATP-binding region signature. 1062 1085 IPR017441 GO:0005524
Gma13g02913 1348 SMART serkin_6 1056 1317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02913 1348 SUPERFAMILY Protein kinase-like (PK-like) 1052 1324 IPR011009 -
Gma13g02913 1348 Pfam Galactose binding lectin domain 762 837 IPR000922 GO:0030246
Gma13g02913 1348 Pfam Protein kinase domain 1056 1317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02913 1348 ProSiteProfiles Protein kinase domain profile. 1056 1317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02913 1348 Pfam Glycosyl hydrolases family 35 33 337 IPR031330 -
Gma13g02913 1348 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Gma13g02913 1348 Gene3D - 577 732 - -
Gma13g02913 1348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1183 1195 IPR008271 GO:0004672|GO:0006468
Gma13g02913 1348 PANTHER BETA-GALACTOSIDASE RELATED 5 834 IPR001944 GO:0004553|GO:0005975
Gma13g02913 1348 Gene3D Phosphorylase Kinase; domain 1 1050 1153 - -
Gma13g02913 1348 Pfam Beta-sandwich domain in beta galactosidase 345 415 IPR041392 -
Gma13g02913 1348 Gene3D - 420 570 - -
Gma13g02913 1348 SUPERFAMILY (Trans)glycosidases 26 342 IPR017853 -
Gma13g02913 1348 Gene3D - 754 845 IPR043159 -
Gma13g02913 1348 SUPERFAMILY Galactose-binding domain-like 583 749 IPR008979 -
Gma13g02913 1348 PANTHER BETA-GALACTOSIDASE 5 834 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02913 Gma-Chr13 43699863 43715010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02913 23 693 Glycoside Hydrolase AT2G28470 77.253 0.0 1098
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Gma13g02913 Glyco_hydro_35 4.6e-118 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02913 - - gmx:100804036 1717.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02913 13 43699863 43715010 Gma13g02913 13 43699863 43715010 ECH