Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02911 ATGGGGAATATCGAAAGCCGGAGAAGGAGGCGGCGCCACCCCACTCCACCACCACCACAACAAGAGGCAAACACAAACTACTACTTTGCACCTCGTCTTCCTTACTACCCCAACACCCTTCTTCCTCCTTATCACTACTACCCTCAACAACCACCTTCCCTTCACCACGAGAAAGCTGTCACCATCAGGAATGATGTCAATATCAAGAAGGACACTCTTCGAATGGAGCCTGATCAACACAACCCTCACCATTTTCTTGTCACTTTCACCTTTGATTCCATTGCTCCTGGATGCATTACAGTAATGTTTTTTGCCAAGGAAACTTTAGATGGTAAGCTGATAGCTGTAAAGAAAAGCTTGCTCAAACAAATCTCAATGCCTTTTCAGCAAGGTCTTTGTCAGAAATTCAGACAACCTTCTGGAACTGGCATTGAAATCTCAATGTTAGAGGAGACAGGACTGACCAAAGTAGGTGACACAGAAGTTTATCCTCTTGTGCTGAAGGCTGAGGTTCGACCATTAAACCATTATGAAAATGAGGGAAACCCATCTTCTCAAATTACTTTGGCTAGTTTTGGAAAAAGGGAGAGGGGTGAGTACAAGGTCCAAGTAATGAAACAGGTTCTCTGGGTCAATGGGAAGAGGTATGAACTGCAGGAGATATACGGCATTGGGAATGTTAGTGATGGTGATAGCCATGAATCTGGTGGAGATTGTGTAATTTGTTTGTCAGAACCGCCAGACATAACTGTCCTACCTTGCCGACACATGTGCATGTGCAGTGGCTGTGCTAATCTTCTGAAAGTTCATACAGCCAACTGCCCCATCTGTCGGTATCCAGTTGAGAGGCTTTTGGAAATTAAAGTAAATAATGGATATGTTATGGACCAGAGAGGGAAAAAAAAACAGTGCATGAGTCTTGTTTGA 927 0.4401 MGNIESRRRRRRHPTPPPPQQEANTNYYFAPRLPYYPNTLLPPYHYYPQQPPSLHHEKAVTIRNDVNIKKDTLRMEPDQHNPHHFLVTFTFDSIAPGCITVMFFAKETLDGKLIAVKKSLLKQISMPFQQGLCQKFRQPSGTGIEISMLEETGLTKVGDTEVYPLVLKAEVRPLNHYENEGNPSSQITLASFGKRERGEYKVQVMKQVLWVNGKRYELQEIYGIGNVSDGDSHESGGDCVICLSEPPDITVLPCRHMCMCSGCANLLKVHTANCPICRYPVERLLEIKVNNGYVMDQRGKKKQCMSLV 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02911 308 ProSiteProfiles Zinc finger RING-type profile. 239 278 IPR001841 -
Gma13g02911 308 MobiDBLite consensus disorder prediction 1 25 - -
Gma13g02911 308 Pfam Zinc finger, C3HC4 type (RING finger) 238 283 - -
Gma13g02911 308 PANTHER MAHOGUNIN 1 293 IPR045194 GO:0061630
Gma13g02911 308 SUPERFAMILY RING/U-box 238 284 - -
Gma13g02911 308 PANTHER - 1 293 - -
Gma13g02911 308 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 226 288 IPR013083 -
Gma13g02911 308 SMART ring_2 239 277 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02911 Gma-Chr13 43679398 43681834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02911 43 258 C3H Transcription Factor Family AT3G09770 52.838 9.60e-76 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02911 - - gmx:100816136 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02911 13 43679398 43681834 Gma13g02911 13 43679398 43681834 ECH