Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02890 ATGACTTTTGCTAACTCAAGATCTGCAAGTTTTGAAGATGATCCGGAGCTAGCAAAATTTCCATCAACCAACGGTGACAATGGCGTTAAGATTAAATTTCACATTGACGGAACACAAATACCTGAGCCTAGTTCTAATATGGCTCAGAAAAAGGTGACAGGGAAGTTCTTGAAAGCTAGAATGTTGTCAAGAGTGTTCTCCGAAGACTACGACCGAGTAAATCGAAGAGTGTTAGATCCTAGGGGACAAACCATACACCGATGGAACAAGATTTTCTTGGTAGCATGTTTAGCATCTTTGTTTGTGGACCCTTTGTTCTTTTATCTTCCAGTGGTTCGAGATGAAGTGTGCATTGATATTGGAATAACTATTGAAGTTATCCTCACATTGGTAAGATCAGTGGTGGATGTCTTTTATGTGTTTCAGATTTTGATGAAGTTTCGGACGGCTTTTGTTGCTCCTTCTTCAAGAGTTTTTGGGAGAGGAGAACTTGTTGTAGGATATTATAAGATTGCATTTAGGTACCTCCGCAAGGGTTTCTGGTTAGATTTTGTTGCCGCCCTGCCCCTTCCTCAGGTGTTAATTTGGATTGTTATCCCAGCTCTTAGGGGTTCAACCATGGCAAACACAAAAAATGTCCTTCGCTTTTTCATCATTTTCCAATATATTCCGAGGCTAGTTTTGATTTTCCCACTTTCATCACAAATTGTTAAAGCTACAGGGGTTGTGACAGAAACGGCATGGGCAGGGGCTGCTTACAACCTTATGCTTTACATGCTGGCTAGCCATATTTTAGGGGCTTGCTGGTACCTTCTATCAATCGAACGTCAAGAAGCATGCTGGAGAAGTGTATGTGATTTGGAGAAGTCATTTTGTCAATATGGATTCTTTGACTGCCACAGGGTAAAAGATGCACTCAGGGTGTCCTGGTTTATGGCAAGTAATATCACAAATTTATGCTCACCAAATGCAAACGATGACTTCTATCAGTTTGGTATATACGCTGATGCCGTGACTTCCAAAGTTACATCCTCGGCATTCTTTAATAAGTACTTCTTTTGCCTGTGGTGGGGCCTGAGGAATTTGAGTTCTTTGGGACAAGGCCTTCTTACTAGCACACATGTTGGAGAAATAATGGTCGCCATTGTTGTTGCAACCCTTGGATTGGTTCTTTTTGCACTGCTAATTGGTAATATGCAGACATATCTCCAATCAACTACTGTTCGCTTAGAAGAGTGGAGGGTGAAAAGAACTGATACAGAACAATGGATGCATCACAGGCAACTACCTCCAGAACTAAGAGAAACTGTGCGAAAATATGACCAATACAAATGGTTGGCTACACGAGGAGTCGATGAAGAAGCTCTTCTTAAAGGACTTCCCGTGGATCTTCGGAGAGACATCAAGCGCCACCTCTGTCTTGATCTAGTCCGAGGAGTGCCATTATTTGATCAAATGGACGAGAGAATGCTGGACGCAATATGCGAGAGACTAAAGCCAGCATTGTGCACAGAGGGCACGTTTCTGGTCCGCGAGGGTGATCCTGTGAACGAGATGCTCTTCATAATCCGAGGCCATCTCGATTCTTACACCACCAACGGGGGCCGGGCCGGGTTCTTCAACTCGTGCCGTATTGGGCCGGGCGATTTCTGCGGCGAGGAGCTTCTGACATGGGCCTTGGACCCACGGCCCAGTGTGATACTCCCCTCATCCACTCGAACAGTGAAATCCATCTCAGAAGTGGAGGCCTTTGCACTCATAGCCGAAGACCTGAAATTCGTTGCGTCACAGTTTAGAAGACTACACAGCAAACAACTCAGACATAAGTTCAGGTTTTACTCTCACCACTGGAGAACTTGGGCTGCGTGTTTCATTCAAGCTGCATGGAGAAGGCACAAGAAAAGAAAGCAAGTGGCTGAACTAAGGGCAAGGGCAATTAATGTTAATATTGCTGAGCCTGAAACACCAACTAGGACAGATTCTGGCCTTGTAAGCTCCTTGCAGAAGCCAGCAGAACCTGATTTCTCTGTTGATGAATGA 2040 0.4441 MTFANSRSASFEDDPELAKFPSTNGDNGVKIKFHIDGTQIPEPSSNMAQKKVTGKFLKARMLSRVFSEDYDRVNRRVLDPRGQTIHRWNKIFLVACLASLFVDPLFFYLPVVRDEVCIDIGITIEVILTLVRSVVDVFYVFQILMKFRTAFVAPSSRVFGRGELVVGYYKIAFRYLRKGFWLDFVAALPLPQVLIWIVIPALRGSTMANTKNVLRFFIIFQYIPRLVLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHILGACWYLLSIERQEACWRSVCDLEKSFCQYGFFDCHRVKDALRVSWFMASNITNLCSPNANDDFYQFGIYADAVTSKVTSSAFFNKYFFCLWWGLRNLSSLGQGLLTSTHVGEIMVAIVVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPPELRETVRKYDQYKWLATRGVDEEALLKGLPVDLRRDIKRHLCLDLVRGVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRAGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKSISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHHWRTWAACFIQAAWRRHKKRKQVAELRARAINVNIAEPETPTRTDSGLVSSLQKPAEPDFSVDE 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02890 679 MobiDBLite consensus disorder prediction 654 679 - -
Gma13g02890 679 SUPERFAMILY cAMP-binding domain-like 412 608 IPR018490 -
Gma13g02890 679 Gene3D - 92 406 - -
Gma13g02890 679 SUPERFAMILY Voltage-gated potassium channels 79 404 - -
Gma13g02890 679 MobiDBLite consensus disorder prediction 1 23 - -
Gma13g02890 679 Pfam Ion transport protein 88 409 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma13g02890 679 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 649 - -
Gma13g02890 679 ProSiteProfiles IQ motif profile. 618 647 IPR000048 GO:0005515
Gma13g02890 679 PANTHER - 4 649 - -
Gma13g02890 679 CDD CAP_ED 482 613 IPR000595 -
Gma13g02890 679 SMART cnmp_10 482 613 IPR000595 -
Gma13g02890 679 ProSiteProfiles cAMP/cGMP binding motif profile. 482 567 IPR000595 -
Gma13g02890 679 Gene3D Jelly Rolls 480 600 IPR014710 -
Gma13g02890 679 Gene3D Helix hairpin bin 409 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02890 Gma-Chr13 43477782 43481491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02890 54 678 Ion Channels AT2G28260 76.415 0.0 1021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02890 K05391 - gmx:100811847 1371.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02890 13 43477782 43481491 Gma13g02890 13 43477782 43481491 ECH
Gma13g02890 13 43477782 43481491 Gma12g01651 12 36692363 36696317 GST
Gma13g02890 13 43477782 43481491 Gma12g00681 12 6000894 6006235 PCT
Gma12g00681 12 6000894 6006235 Gma13g02890 13 43477782 43481491 PCT