Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02882 ATGTGCAAGACAAAGATGGCAACCAACGCGGCCAGTCCCACTCGCACTCCACGCTCCCAACAACGCCCCACCCAAAGCCCAAGGACACCCTCGTCAAGGCCCACGCTCAGGCCCACCTCTTTCTCCAACAATCCCTCCACCTCCTACAGCGGCTCCACCGGTTACCGCCTCTCCTCTGACACCTCCATCTCAAGCTTCTCCTCCATCACCTCCCTCCGCGACACGCTCCCCGAAAACCCCCACATCTACGACTTCTCCGAAATCTGTGCCGCCACCAACAACTTCCTCTCCAAACGCCACTCCTCCTCCACCCCTTGCTGGCGCTGCACCCTCCGTGGCGCCGACGTCATTGTCTTCCAGCGCAAGTTTCGCGGCAAACTCCAAACCAACCAGCTCCAGCAACTCCTCTCCGTCGTCTGCCGCAGCCACCACGTCAGCATCATCAAACTCCTTGGTGCCTCCGTCTCCGGTGACCACATCTACCTTGTCTACGACTTCGTCAGCAACGGCGCCACCCTCTCCGACTGCCTCCGCAACAAAAACAACGCGCACTTCACCGTTCTCTCCACGTGGATGTCGCGAATACAGGTCGCCACGGATCTCGCTCACGGCCTCGATTACATTCACAACAAAACCGGTTTGAACATCAATTTCGTCCATAACCATATCAAGAGCAGCGGAATCATCGTCACCGAGCCTTCCTTCAATGCTAGGGTTTGCCACTTCGGCGCCGCGCAGCTCTGCGGCGAAGTCGAACTCCAGAACCAGAAATTAGGCGAAATTAGTGAAATCGAGGAAAAAATAACATCATCGCCGGCGAGATCCAAGAAGTTCGAGGGCGTGCGGGGGTACATTGCGCCAGAATTTCCAGCCTCCGGCGTTGCGACTCAGAAGTCTGATATATACGCTTTCGGAGTGGTGATGTTGGAGCTTTTGTCCGGGGAAGAGCCGTTGAAGTTCAAGTGTGACGAGAAAACGCGCGAATTTGTGAGGATGTCGGTGATTGATGCGGCGAGGGCCGCCGTGGACGGCGACGAGGGTAGCGTGGAGGGGAAGCTGAGGAGGTGGGTGGATCGGAGACTGAAAGATTCTTTTCCTGTCGACGTTGCTGAGAAGTTGACACGTGTCGCGCTGGAGTGCGTACACGTGGATCCAGATAAGAGACCGAACATGGGACGCGTGGCTGGAAAGATCTCAAAGTTTTATTTGACGTCGAGGATCTGGTCAGATAGTATTAAGATGCCTGATATTACTGTTACGTTGGGACCTCGATGA 1275 0.5576 MCKTKMATNAASPTRTPRSQQRPTQSPRTPSSRPTLRPTSFSNNPSTSYSGSTGYRLSSDTSISSFSSITSLRDTLPENPHIYDFSEICAATNNFLSKRHSSSTPCWRCTLRGADVIVFQRKFRGKLQTNQLQQLLSVVCRSHHVSIIKLLGASVSGDHIYLVYDFVSNGATLSDCLRNKNNAHFTVLSTWMSRIQVATDLAHGLDYIHNKTGLNINFVHNHIKSSGIIVTEPSFNARVCHFGAAQLCGEVELQNQKLGEISEIEEKITSSPARSKKFEGVRGYIAPEFPASGVATQKSDIYAFGVVMLELLSGEEPLKFKCDEKTREFVRMSVIDAARAAVDGDEGSVEGKLRRWVDRRLKDSFPVDVAEKLTRVALECVHVDPDKRPNMGRVAGKISKFYLTSRIWSDSIKMPDITVTLGPR 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02882 424 MobiDBLite consensus disorder prediction 1 56 - -
Gma13g02882 424 ProSiteProfiles Protein kinase domain profile. 55 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02882 424 SUPERFAMILY Protein kinase-like (PK-like) 78 394 IPR011009 -
Gma13g02882 424 Gene3D Phosphorylase Kinase; domain 1 58 166 - -
Gma13g02882 424 Pfam Protein kinase domain 127 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02882 424 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 424 - -
Gma13g02882 424 Gene3D Transferase(Phosphotransferase) domain 1 169 410 - -
Gma13g02882 424 PANTHER OS09G0572100 PROTEIN 1 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02882 Gma-Chr13 43388671 43390220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02882 78 412 Receptor kinase-like Gene Family AT1G51940 32.153 9.21e-43 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gma13g02882 Pkinase 3.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02882 - - gmx:100809183 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02882 13 43388671 43390220 Gma13g02882 13 43388671 43390220 ECH
Gma13g02882 13 43388671 43390220 Gma12g01663 12 36905080 36906623 ECH
Gma13g02882 13 43388671 43390220 Gma12g01663 12 36905080 36906623 GST