Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02881 ATGGCTGAGATTGAGGGTTCTCCCGGAAGCTCCATGCATGGAGTAACAGGAAGAGAACAAACATTTGTAGCCTCAGTTGCTTCTCCAATTGTCCCTACAGACACCACAGCCAAATTTGCTCTCCCAGTGGATTCAGAACACAAGGCCAAGGTTTTCAAACTCTTCTCCCTGGCCAATCCCCACATGAGAACCTTCCACCTTTCTTGGATCTCCTTCTTCACCTGCTTCGTCTCGACATTCGCAGCAGCACCTCTTGTGCCCATCATCCGCGACAACCTTAACCTCACCAAAAGCGACATTGGAAACGCCGGGGTTGCTTCTGTCTCCGGAAGCATCTTCTCAAGGCTCGCAATGGGTGCAGTCTGTGACATGTTGGGTCCACGCTATGGCTGCGCCTTCCTCATCATGCTTTCGGCCCCTACGGTGTTCTGCATGTCCTTTGTGAAAGATGCTGCGGGGTACATAGCGGTTCGGTTCTTGATTGGGTTCTCGTTGGCGACGTTTGTGTCGTGCCAGTACTGGATGAGCACGATGTTCAACAGTAAGATTATAGGGCTTGCGAATGGGACTGCTGCGGGGTGGGGGAACATGGGTGGTGGAGCCACTCAGCTCATAATGCCTTTGGTGTATGAGCTTATCAGAAGAGCTGGGGCTACTCCCTTCACTGCTTGGAGGATTGCCTTCTTTGTTCCGGGTTTCATGCATGTCATCATGGGGATTCTTGTCCTCACTCTAGGCCAGGACTTGCCTGATGGAAACCTCGGGGCCTTGCGGAAGAAGGGTGATGTAGCTAAAGACAAGTTTTCCAAGGTGCTATGGTATGCCATAACAAATTACAGGACATGGATTTTTGCTCTCCTCTATGGGTACTCCATGGGAGTTGAATTAACAACTGACAATGTCATTGCTGAGTATTTCTATGACAGATTTAATCTCAAGCTACACACTGCTGGAATCATTGCTGCTTCATTTGGAATGGCAAACTTAGTTGCTCGACCTTTTGGTGGATATGCTTCAGATGTTGCAGCCAGGCTGTTTGGCATGAGGGGAAGACTCTGGACCCTTTGGATCCTCCAAACCTTAGGAGGGGTTTTCTGTATTTGGCTTGGCCGTGCCAATTCTCTTCCTATTGCTGTATTGGCCATGATCCTGTTCTCTATAGGAGCTCAAGCTGCATGTGGTGCAACTTTTGGCATCATTCCTTTCATCTCAAGAAGGTCTTTGGGGATCATATCAGGTCTAACTGGTGCAGGTGGAAACTTTGGGTCTGGCCTCACCCAATTGGTCTTCTTTTCAACCTCCAAATTCTCTACTGCCACAGGTCTCTCCTTGATGGGTGTAATGATAGTGGCTTGCACTCTACCAGTGAGTGTTGTTCACTTCCCACAGTGGGGTAGCATGTTTCTACCACCCTCAAAAGATGTCAGCAAATCCACTGAAGAATTCTATTACACCTCTGAATGGAATGAGGAAGAGAAGCAGAAGGGTTTGCACCAGCAAAGTCTCAAATTTGCTGAGAATAGCCGATCTGAGAGAGGAAagcgagtggcttcagcaccaacacctccaaatgcaactcccactcatgtctag 1593 0.4708 MAEIEGSPGSSMHGVTGREQTFVASVASPIVPTDTTAKFALPVDSEHKAKVFKLFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKSDIGNAGVASVSGSIFSRLAMGAVCDMLGPRYGCAFLIMLSAPTVFCMSFVKDAAGYIAVRFLIGFSLATFVSCQYWMSTMFNSKIIGLANGTAAGWGNMGGGATQLIMPLVYELIRRAGATPFTAWRIAFFVPGFMHVIMGILVLTLGQDLPDGNLGALRKKGDVAKDKFSKVLWYAITNYRTWIFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGIIAASFGMANLVARPFGGYASDVAARLFGMRGRLWTLWILQTLGGVFCIWLGRANSLPIAVLAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTSKFSTATGLSLMGVMIVACTLPVSVVHFPQWGSMFLPPSKDVSKSTEEFYYTSEWNEEEKQKGLHQQSLKFAENSRSERGKRVASAPTPPNATPTHV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02881 530 Gene3D MFS general substrate transporter like domains 264 465 IPR036259 -
Gma13g02881 530 Gene3D MFS general substrate transporter like domains 58 253 IPR036259 -
Gma13g02881 530 MobiDBLite consensus disorder prediction 489 530 - -
Gma13g02881 530 MobiDBLite consensus disorder prediction 489 513 - -
Gma13g02881 530 SUPERFAMILY MFS general substrate transporter 59 458 IPR036259 -
Gma13g02881 530 CDD MFS_NRT2_like 65 456 IPR044772 GO:0015112
Gma13g02881 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
Gma13g02881 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 1 527 - -
Gma13g02881 530 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
Gma13g02881 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 527 IPR044772 GO:0015112
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02881 Gma-Chr13 43344022 43346761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02881 1 530 Inorganic Solute Cotransporters AT5G60770 80.755 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02881 K02575 - gmx:547946 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02881 13 43344022 43346761 Gma13g02881 13 43344022 43346761 ECH
Gma13g02881 13 43344022 43346761 Gma12g01665 12 36990221 36992774 GST
Gma13g02881 13 43344022 43346761 Gma12g00702 12 6259454 6259876 PCT
Gma13g02881 13 43344022 43346761 Gma11g01605 11 17270857 17274133 PCT
Gma12g00702 12 6259454 6259876 Gma13g02881 13 43344022 43346761 PCT
Gma11g01605 11 17270857 17274133 Gma13g02881 13 43344022 43346761 PCT