Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02876 ATGGCCAACTTCAGTGTCAGAAACAGCAGCAGCAGCAGCAGCAAAAAGAAGAGCGTAGTAGGAGGCATTGTGAAGTTCAAATTCGTCGTTGAGAAGCTCCAAAAGAGACTCCTAATGGGGAGAAACAAAGAAGGGTGTGATTCTTCTTTAAACTCAAGCTATGTGCCAGAGGACGTGAAGGAAGGACACTTCGCAGTGATTGCGGAGGGTGGAGAGGAACAAAAGAGGTTCGTGCTGCCACTAAGCTGTTTAACCAACCCAACGATTTTGAAGCTATTGGAGCAAGCTGAAGAAGAGTATGGCTTTGATCATGGAGGTGCAGTAACCATTCCTTGCAGGCCTTGTGAACTTGAGAGTATACTTGCTCACCAATGGCATACCCAAACTACTACTACTGGACCAAGGTGGACTTGTAGAAAATCCATGGTATTTTGA 435 0.4575 MANFSVRNSSSSSSKKKSVVGGIVKFKFVVEKLQKRLLMGRNKEGCDSSLNSSYVPEDVKEGHFAVIAEGGEEQKRFVLPLSCLTNPTILKLLEQAEEEYGFDHGGAVTIPCRPCELESILAHQWHTQTTTTGPRWTCRKSMVF 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02876 144 Pfam Auxin responsive protein 42 122 IPR003676 GO:0009733
Gma13g02876 144 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 29 130 - -
Gma13g02876 144 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 130 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02876 Gma-Chr13 43300642 43301076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02876 14 112 Calmodulin-binding Proteins AT5G20810 37.374 1.84e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02876 - K14488 gmx:102668167 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02876 13 43300642 43301076 Gma13g02876 13 43300642 43301076 ECH
Gma13g02876 13 43300642 43301076 Gma12g01670 12 37045384 37045794 GST
Gma13g02876 13 43300642 43301076 Gma12g00706 12 6278961 6279347 PCT
Gma13g02876 13 43300642 43301076 Gma11g01601 11 17248261 17248671 PCT
Gma12g00706 12 6278961 6279347 Gma13g02876 13 43300642 43301076 PCT
Gma11g01601 11 17248261 17248671 Gma13g02876 13 43300642 43301076 PCT