Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02852 ATGGCGTTATTTTGGCCGCACGTGCTGCAGTTCCGTTCTCAACCTTCGCTCGGACATGCTAACTGCGTGTTCTTCTCCGATCTCACTGAATCCCGCTCTGTAGAACTTTCATGCACTGATTCCTTCACTCTGGTTCGCCGGTGCAAGATCTCCGGTCCGGCTCCGGCGGCGCTGAAACCGGTGAAATGCCTCGGCAGATCTACGGGGGAGAAGCAATGGAGTGACGCCGAAACTGCCGTATCCgacaccgacgaagttgctgatgaaccgaatgaccggaaccaaacttctgttccgacaaatggtcgcgttgagtcgcagaggattgccaccacgtcttccggcgactctctctctctcggaattcgagaaccggtttatgaaGTTGTTGAAGTGAGGTCCAATGGGAAAGTATCAACTAGAAAAATCAACAGGAGACAATTGTTGAAGTCAAGTGGTCTTCGTCCACGGGACATTCGAAGTGTGGATCCTTCATTGTTTATGACAAATTCAATGCCTGCTTTGCTGGTCCGGGAGTATGCTATACTTCTAAATCTGGGTTCACTACGAGCAATAGCAATGCAAGATTGTGTACTTATATTTGACAATAATCGTATAGGAGGGAAAGCTTTTCTGGAGACATTGCTACCTCGATTGAACCCCAAGAACAACAATGGAGGGCCATCAATGCCATTTGAACTTGAGGTTGTTGAAGCAGCATTGCTTTCAAGAATACAGCGATTGGAGCAGAGATTGATGGACTTAGAACCTCGTGTACAAGCTCTTCTTGAGGCATTGCCAAATCGGTTAACTGGTGACATATTGGAGCAGCTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGTTCTAAGGCAGGAGCTCTCAGACAGATGCTGCTTGACCTTCTGGAGGATCCCCATGAAATACGCCGTATATGTATCATGGGAAGAAACTGCACACTTAGTAAAGGAAACAATGATATGGAATGTTCAGTGCCTTTTGAAAAGCAGAATGCTGAGGAGGAGGAGGAGGAAATCGAAATGCTTCTGGAAAATTATCTTCAAAGATGTGAATCTTGTCATGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCTGTCAGTTTGAGTTCACGTAGGCTTGAGGTTAGCAGAGTAGAACTGCTTTTGCAGGTTGGAACATTCTGCGTGGCAATAGGCGCCCTTGTAGCAGGTATATTTGGCATGAACCTGAAGTCCTATCTTGAGGAACATGTGTTGGCATTTTGGCTGACAACAGCAGGGATAATTATTGAAACTTATAAACTAGGTGATGTCAGGTTGTGA 1344 0.4055 MALFWPHVLQFRSQPSLGHANCVFFSDLTESRSVELSCTDSFTLVRRCKISGPAPAALKPVKCLGRSTGEKQWSDAETAVSDTDEVADEPNDRNQTSVPTNGRVESQRIATTSSGDSLSLGIREPVYEVVEVRSNGKVSTRKINRRQLLKSSGLRPRDIRSVDPSLFMTNSMPALLVREYAILLNLGSLRAIAMQDCVLIFDNNRIGGKAFLETLLPRLNPKNNNGGPSMPFELEVVEAALLSRIQRLEQRLMDLEPRVQALLEALPNRLTGDILEQLRISKQTLVELGSKAGALRQMLLDLLEDPHEIRRICIMGRNCTLSKGNNDMECSVPFEKQNAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLSSRRLEVSRVELLLQVGTFCVAIGALVAGIFGMNLKSYLEEHVLAFWLTTAGIIIETYKLGDVRL 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02852 447 CDD Mrs2_Mfm1p-like 129 437 IPR039204 -
Gma13g02852 447 Gene3D Magnesium transport protein CorA, transmembrane region 205 387 - -
Gma13g02852 447 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 70 437 IPR039204 -
Gma13g02852 447 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 70 437 - -
Gma13g02852 447 Coils Coil 332 356 - -
Gma13g02852 447 Coils Coil 245 265 - -
Gma13g02852 447 MobiDBLite consensus disorder prediction 69 101 - -
Gma13g02852 447 Gene3D - 122 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02852 Gma-Chr13 43019976 43025932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02852 120 437 MRS2 Gene Family AT5G22830 84.591 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02852 K16075 - gmx:100808371 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02852 13 43019976 43025932 Gma13g02852 13 43019976 43025932 ECH
Gma13g02852 13 43019976 43025932 Gma12g01699 12 37488177 37494424 GST