Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02824 ATGCGTCTCCACTCCAGTCCACTCCTGTGCCTCTCGTCTCCCTTTGCACAAACCCTAACACCTAAAAGCCAGAAGAAGCGAAATCGTAATCGCAATCTAGCGGATATGAAGGTCGTCGCTGCATACTTGCTCGCAGTGTTGGGAGGGAATCCATCTCCTTCTGCCGATGATATCAAAAACATCCTCGGCGCAGTTGGAGCTGAGGCTGAGCATGAGTTGATTGAGTTGCTCTTGACCGAAGTCAAGGGCAAAGACTTCAATGAGCTACTTGCTAGTGGAAGTGAAAAGATTTCTGCAGTGGCTGGTGGTGGTGCAGCGGTTGCTGTTGCTGCTGCACCAGCGGGAGGTGCTGGTGGCGGTGCTGCACCTGCTGCCGAAGCAAAGGAAGAAAAGAAAGTAGAAGAGAAGGAGGAATCTGATGATGATATGGGTTTCAGTTTGTTCGACTAA 450 0.5067 MRLHSSPLLCLSSPFAQTLTPKSQKKRNRNRNLADMKVVAAYLLAVLGGNPSPSADDIKNILGAVGAEAEHELIELLLTEVKGKDFNELLASGSEKISAVAGGGAAVAVAAAPAGGAGGGAAPAAEAKEEKKVEEKEESDDDMGFSLFD 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02824 149 MobiDBLite consensus disorder prediction 125 139 - -
Gma13g02824 149 CDD Ribosomal_P2 36 149 IPR044076 GO:0002182|GO:0003735|GO:0022625
Gma13g02824 149 Pfam 60s Acidic ribosomal protein 52 148 - -
Gma13g02824 149 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 36 149 IPR044076 GO:0002182|GO:0003735|GO:0022625
Gma13g02824 149 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 36 149 - -
Gma13g02824 149 Gene3D - 35 94 IPR038716 -
Gma13g02824 149 Hamap 50S ribosomal protein L12 [rpl12]. 37 149 IPR027534 GO:0003735|GO:0005840|GO:0006414
Gma13g02824 149 MobiDBLite consensus disorder prediction 114 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02824 Gma-Chr13 42764887 42766461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02824 36 149 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 62.609 1.64e-27 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02824 K02943 - gmx:100791682 140.198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02824 13 42764887 42766461 Gma12g01727 12 37823474 37825198 GST