Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02810 ATGTCTCTCCAACAACCAAATCAAGAGGTGCCATTGCAAGAACCAGAAGCCACATTTTCTCAACTGAGCAAACAAAACTCAATACTCTCACTCACCCTTGATGAGTTCTATTGCAAGAATGGGAAGAGCTTAGGTTCCATGAACATGGATGAATTCCTTTCCAGCATTTGGAACTCAGATGATAACAACCAAGTTAACCCACCACTACCAACCCTTGATGAAGCTGCGAAGGGTAAAAGTGTAATAGCAACAGAACCCACCACAATTTCCCAGCCAGGCTCATTATCTGTCCCTCCTCCAATTTGCAAGAAAACAGTGGATGAAGTTTGGTCTCAGATCCACAAAAGCCAACCAGACCACAATGATGCTAACAATAGCCTTGCAAGGAATGAGCCACTACTCAAAAGGCAACAAACACTTGGGGAAATGACTTTAGAGGATTTCCTAGTAAAAGCTGGGGTGGTACAAGAATCATCATCACTATTCAAGTCTTCATTATTACCTCAGAATCAGATTGGTAACATTGCAAGTAATGGACCATTGGGTGCAGGTTATAGGTTGAGGCCTGTAATAGGGACAGGATCTAGTGTGTCTTGTAATGGACTTGAAACACAAAACATGTTGGCACAGAATAACAACTTAGTTGTAAAGGATCTCACTACAAATGGTGCTGTGGAGAAATGTCCAAGCTTGGGAGAATCAAATGGGAAGGGTAATAGGAAGAGGATCATTGATGGTCCTCCTGAAGTGGTAGTAGAGAGAAGGCAGCGCAGAATGTTGAAGAATCGAGAATCAGCTGCACGTTCTCGAGCACGAAGACAGGCATATACGGTGGAACTAGAAGCAGAGTTGAATCTGCTAAAGGAagagaacgaaaagctcaaacaaactctgGCTGAAGCTGAACGCAAGAGAAAACAAGAGATTTCTCAGAGAAAGCACACAACAATGGCTCAAAAGAGGACAGAAAATTTGAGGGCAATGAGGAGGCCTCTAAGCGCATCCTGGTGA 1011 0.4224 MSLQQPNQEVPLQEPEATFSQLSKQNSILSLTLDEFYCKNGKSLGSMNMDEFLSSIWNSDDNNQVNPPLPTLDEAAKGKSVIATEPTTISQPGSLSVPPPICKKTVDEVWSQIHKSQPDHNDANNSLARNEPLLKRQQTLGEMTLEDFLVKAGVVQESSSLFKSSLLPQNQIGNIASNGPLGAGYRLRPVIGTGSSVSCNGLETQNMLAQNNNLVVKDLTTNGAVEKCPSLGESNGKGNRKRIIDGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAELNLLKEENEKLKQTLAEAERKRKQEISQRKHTTMAQKRTENLRAMRRPLSASW 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02810 336 Coils Coil 273 311 - -
Gma13g02810 336 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 252 304 IPR004827 GO:0003700|GO:0006355
Gma13g02810 336 PANTHER BZIP TRANSCRIPTION FACTOR 2 336 - -
Gma13g02810 336 Pfam bZIP transcription factor 254 306 IPR004827 GO:0003700|GO:0006355
Gma13g02810 336 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 257 272 IPR004827 GO:0003700|GO:0006355
Gma13g02810 336 SUPERFAMILY Leucine zipper domain 254 303 IPR046347 GO:0003700|GO:0006355
Gma13g02810 336 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 336 IPR043452 GO:0003700|GO:0045893
Gma13g02810 336 MobiDBLite consensus disorder prediction 299 322 - -
Gma13g02810 336 MobiDBLite consensus disorder prediction 227 246 - -
Gma13g02810 336 Gene3D - 252 308 - -
Gma13g02810 336 SMART brlzneu 250 314 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02810 Gma-Chr13 42646752 42648158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02810 5 336 bZIP Transcription Factor Family AT3G44460 43.440 3.28e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma13g02810 bZIP_1 2.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02810 K14432 - gmx:100799576 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02810 13 42646752 42648158 Gma13g02810 13 42646752 42648158 ECH
Gma13g02810 13 42646752 42648158 Gma12g01741 12 37995503 38006410 GST