Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02809 ATGGCGAGCCACAGAATAGGAGAACTTGGTTTGTCTGAGTCAAGACCTTCAACTCACCACATCCCTTATGGAGTGCTTCAAGGAATTAACACTCCTGCGTCAAGCTTAATCAATCAAGGATCTGCTTTTGATTTTGGGGAGCTGGAGGAAGCAATTGTTCTGCATGGAGTTAAGAGTAGAAATGATGAGGGCAAAACAtCTTTATTCACAGCCAGACCTGCAGCTACACTGGAAATGTTCCCTTCATGGCCAATGAGATTCCAGCAAACCCCAAGAAGTGGTTCAAAGTCAGGAGGGGAAAGCACTGATTCAGGTCTTTCTAGCAAAACTGAGCCCCCCTTTGAGGCAGAATCTCCCATAAGCAAAAAGGCATCTTCTTCAGATCATCATCATCAGTCTTTTGATCAGCAGCATCTGCAGCATAGACAGCAACTTCAACAGGAGATGGCAAGTGATGCCCCAAGATCAGCCTCTTCACAGAATCAATCAGCAGCCAAATCACCTCAAGAAAAGAGAAAGGGAGATGGTTCTACTTCAGAGAAACCACTTGATGCAAAGGCATTGAGACGTTTAGCTCAAAACAGAGAGGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAGCTAGAGTCAAGTAGATTAAAGCTTACCCAGATAGAACAAGAACTTCAAAGAGCACGCTCTCAGGGCTTGTTCGTGGATTATGGAGGTGTTGGAAGTACTGTAAGCTCTGCAGGAGCCGCAATGTTTGACATGGAATATGCAAGATGGTTAGAAGAAGATCACAGGCTAATGGGGGAGCTGAGGAACGGGTTGCAAGCACCGTTATCAGATAGTAATATGAGAGTGATGGTGGATGGATATCTTTCTCACTATGATGAAATTTTCAGGCTCAAGGTTGTGGCTGCTAAATCAGATGTGTTCCACCTTATCAATGGCATGTGGACTTCCCAAGCTGAACGTTGCTTCCTCTGGATTGGTGGTTTTAGACCCTCTGATCTCATCACGATGTTGATTCAACAGTTGGAGCCACTAGCTGAGCAACAAATAATGGGGATGTATGGCTTGAGGCATTCCTCACAGCAAGCAGAAGAAGCACTCTCTCAGGGCCTTGAGCAGTTGCAACAGTCTCTTGTGGACACCATAGCTGGAGGCCCAGTTGTTGATGGTGTTCAACAAATGGTCCTTGCCATGAGCAAGCTTGCCAATCTTGAAGGATTTGTTCGCCAGGCTGATAATTTGAGGCAGCAAACTCTTCATCAGCTATGTCGATTACTCACAGTTCGTCAAGCCGCACGATGCTTCATTGTTATTGGAGAGTACTATGGACGTCTTCGTGCCCTTAGTTCTCTTTGGGCATCAAGACCACGAGAGACCTTGATCAGCGACGATAACTCATGTCAAACAACTACGGAAATGCAAATAGTCCAACATTCTCAGAATTATTTCTCAAGTTTCTGA 1470 0.4544 MASHRIGELGLSESRPSTHHIPYGVLQGINTPASSLINQGSAFDFGELEEAIVLHGVKSRNDEGKTSLFTARPAATLEMFPSWPMRFQQTPRSGSKSGGESTDSGLSSKTEPPFEAESPISKKASSSDHHHQSFDQQHLQHRQQLQQEMASDAPRSASSQNQSAAKSPQEKRKGDGSTSEKPLDAKALRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQIEQELQRARSQGLFVDYGGVGSTVSSAGAAMFDMEYARWLEEDHRLMGELRNGLQAPLSDSNMRVMVDGYLSHYDEIFRLKVVAAKSDVFHLINGMWTSQAERCFLWIGGFRPSDLITMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLEQLQQSLVDTIAGGPVVDGVQQMVLAMSKLANLEGFVRQADNLRQQTLHQLCRLLTVRQAARCFIVIGEYYGRLRALSSLWASRPRETLISDDNSCQTTTEMQIVQHSQNYFSSF 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02809 489 MobiDBLite consensus disorder prediction 122 137 - -
Gma13g02809 489 PANTHER TRANSCRIPTION FACTOR TGA9 64 468 - -
Gma13g02809 489 Coils Coil 205 232 - -
Gma13g02809 489 MobiDBLite consensus disorder prediction 80 187 - -
Gma13g02809 489 Pfam Seed dormancy control 268 342 IPR025422 GO:0006351|GO:0043565
Gma13g02809 489 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 189 204 IPR004827 GO:0003700|GO:0006355
Gma13g02809 489 MobiDBLite consensus disorder prediction 168 187 - -
Gma13g02809 489 Pfam bZIP transcription factor 185 221 IPR004827 GO:0003700|GO:0006355
Gma13g02809 489 MobiDBLite consensus disorder prediction 86 111 - -
Gma13g02809 489 SMART brlzneu 182 247 IPR004827 GO:0003700|GO:0006355
Gma13g02809 489 SUPERFAMILY Leucine zipper domain 186 229 IPR046347 GO:0003700|GO:0006355
Gma13g02809 489 CDD bZIP_HBP1b-like 186 236 - -
Gma13g02809 489 ProSiteProfiles DOG1 domain profile. 250 458 IPR025422 GO:0006351|GO:0043565
Gma13g02809 489 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 184 228 IPR004827 GO:0003700|GO:0006355
Gma13g02809 489 Gene3D - 185 234 - -
Gma13g02809 489 MobiDBLite consensus disorder prediction 138 167 - -
Gma13g02809 489 PANTHER TRANSCRIPTION FACTOR TGA9 64 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02809 Gma-Chr13 42637257 42644974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02809 157 489 bZIP Transcription Factor Family AT1G08320 70.270 1.33e-174 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma13g02809 DOG1 3.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02809 K14431 - gmx:778123 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02809 13 42637257 42644974 Gma13g02809 13 42637257 42644974 ECH
Gma13g02809 13 42637257 42644974 Gma12g01742 12 38020356 38028641 GST
Gma13g02809 13 42637257 42644974 Gma12g00791 12 7372985 7381014 PCT
Gma12g00791 12 7372985 7381014 Gma13g02809 13 42637257 42644974 PCT