Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02785 ATGTCTTCCAACAAGAGGAGGTTCATGAGAGCCCTATTCAAAGCAAATGGAGGCTGTGGGTGTAGCAAACCGAAATCCTCTGACGTACACGAACCCACCCCAAAACCCAAAATCTCCATTTACCAAAACACAAAACCTAGCAGCCTCAATTCATCCACCACTTCCGGTGACCGCAACGAGGACGACGAAGTCTTCACTTCCACCACCATCTCCGAATCCGACACAAATCATCAAAACCCCAACAACAACAACATGCCAAAACCTAGCCCAAAACTCGTTGACAGCATCGCCGTCGAGAAGGACTCAAACGACCCACATAAGGATTTTCGAGCCTCCATACTCCAAATGATCCTGGAGAGAGAGATCTACACAGAAACCGAACTCCAAGAGCTTCTCGAGTGCTTCCTCCAGCTGAACGCCACGTGCCACCACCAAGTCATCGTTCAAGCCTTCATGGAGATCTGCGAAGAAGTGTTCCCGAAGAAGAACATCGTCAGTGGTGGTGGCGCTCCTGAACAACGTCGCAGGAACCAGATCACGCGAAAGAGTCGGTGA 555 0.5027 MSSNKRRFMRALFKANGGCGCSKPKSSDVHEPTPKPKISIYQNTKPSSLNSSTTSGDRNEDDEVFTSTTISESDTNHQNPNNNNMPKPSPKLVDSIAVEKDSNDPHKDFRASILQMILEREIYTETELQELLECFLQLNATCHHQVIVQAFMEICEEVFPKKNIVSGGGAPEQRRRNQITRKSR 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02785 184 MobiDBLite consensus disorder prediction 37 55 - -
Gma13g02785 184 ProSiteProfiles OVATE domain profile. 98 157 IPR006458 -
Gma13g02785 184 MobiDBLite consensus disorder prediction 165 184 - -
Gma13g02785 184 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 96 156 IPR006458 -
Gma13g02785 184 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 176 - -
Gma13g02785 184 MobiDBLite consensus disorder prediction 13 91 - -
Gma13g02785 184 MobiDBLite consensus disorder prediction 66 89 - -
Gma13g02785 184 Pfam Transcriptional repressor, ovate 102 159 IPR006458 -
Gma13g02785 184 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 176 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02785 Gma-Chr13 42426001 42427260 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma13g02785 Ovate 6.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02785 - - gmx:102670259 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02785 13 42426001 42427260 Gma13g02785 13 42426001 42427260 ECH
Gma13g02785 13 42426001 42427260 Gma12g01770 12 38290084 38290620 GST
Gma13g02785 13 42426001 42427260 Gma12g00830 12 7763394 7764248 PCT
Gma13g02785 13 42426001 42427260 Gma11g01467 11 15413949 15414567 PCT
Gma12g00830 12 7763394 7764248 Gma13g02785 13 42426001 42427260 PCT
Gma11g01467 11 15413949 15414567 Gma13g02785 13 42426001 42427260 PCT