Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02777 ATGCGGACCACAGTGCACAGTTGCAGCAACATTATCACTGGGCCAATTCCTCAGAATATTGGAACTCTTACTTCCTTGCAGGAACTCAATCTCAATAGTTATCAACTTGTTGGCTTGATTCCAGTGTCCCTAGCACATATGGAACTTGAGATCCTAGTGTTAAATAATAACATGCTAATGTGTCCAATACCAGAATTTAAGGCTGCCAATGTTTCTTATGATAACAACTTATTTTGTCCACCTGAACCTGGGCTTCAATGTTCCCCTCAAGTTGCTGTACTACTTGATTTTCTGGACAAACTGAATTACCCTTCGTTTCTCATATCTGATTGGGTTGGTGATGAACCATGCACACGCAGCACAGGGTTATGGTTTGGATTGAGCTGCAATTCCAACTCAGAGTTTGTTACTGTGGATAACCTTCTTCTTCCTTATCAAACCAGAGGCAGTCCTAGTCTTATGCCTATTAACAGTCCACCTTCACCACAGAATCCATCACATCCTCCATCTTCTCATGAGTCTCCTGTTCCAGATCAGAGTTCAAGATCAAATCAATCCAAACCAAATGACTTGAAAATATTCAAAACAGTAGGAATAGTGGCTGGAGTTGCTGTATTTGCAGTTGTAGCTCTTTTGGTTGTTTATCCCTTCCTATGTTGGAGGAAGAACAAAAAAGCCTCCTTGGATGCTCCAAGTTCCATCATGGTTCACCCCCGCGATCCATCTTTTTCAGATAACATGGTTAAAATTGCGGTTTCAAATGCCACTGTTACCAATGATTTTGCTTCAGAAAATGAACTAGGCTATGGAGGGTTTGGAACTGTTTACAAGGGAGAACTAGGAGATGGGACAAAAATAGTAGTCAAGAGAATGGAGCATGGGGCTATTAACAGTAAGGCATTGGAGGAGTTTCAAGCTGAAATAGCTGTTCTTTCCAAGGTCCGGCACCGACATCTGGTAGCCCTGTTGGGGTATTCCATTGAAGGCAATGAAAGAATTTTGCCAACATCTTTTTCATTGGAAAAGCTTGAAGTTGGAGCCTTTGTCTTGGTCACAGAGGCTTGCAATAGCACTAGATTCTTGCCCGTCAGACCTTTATTCATCGATCTTAAATCTTCTAATATCTTGTTGGGTGTTGATTTTCGGGCTAAAGTTTCAGACTTTGGTTTGGTGAAGCATGCCCCAGATAGTGAGAAGTCTGTAGCAACCAAGCTGCTGGGACATTTGGATACCTTACCCCTGAATATGCAGAAATTGAGCATTCTCTGCATAATGCAATCATTGTACTCTCTTTATATACCAGCATGTAGTTTCTTGATGGGGAAAATCACCACAAAAGTTGTGTTCAGCTACGGAGTGTCGGCCAGAGGAAAGCCGCTGCTTGACCAAATGCATCTGAAGAAACTTTTTGAGAGGATAGGCATTGTAGCTGAACTTGCTGGACACTGCACTGCAAGGGAAGCACATCATAGGCCAGATATGGGTCACGCAGTCAATGTCTTGGCAGCATTGGTGGAAAAATGGAAACCAGTTGATGATGAATTAGATTGCTACTCTGGCATTGACTACACAAGACCACTTCCTCAAATGTTGAAGATTTGGAAGGAAGCAGAAAGTGAAGAGTTTAGCTATGCTTATAGTCTTGCAAACAGCAGAAGCAGTATTGCAGCCAGGTCTTCTGGGTTTGCAGACTCTTTTACTTCTGCTGATGCAAGATGA 1719 0.4241 MRTTVHSCSNIITGPIPQNIGTLTSLQELNLNSYQLVGLIPVSLAHMELEILVLNNNMLMCPIPEFKAANVSYDNNLFCPPEPGLQCSPQVAVLLDFLDKLNYPSFLISDWVGDEPCTRSTGLWFGLSCNSNSEFVTVDNLLLPYQTRGSPSLMPINSPPSPQNPSHPPSSHESPVPDQSSRSNQSKPNDLKIFKTVGIVAGVAVFAVVALLVVYPFLCWRKNKKASLDAPSSIMVHPRDPSFSDNMVKIAVSNATVTNDFASENELGYGGFGTVYKGELGDGTKIVVKRMEHGAINSKALEEFQAEIAVLSKVRHRHLVALLGYSIEGNERILPTSFSLEKLEVGAFVLVTEACNSTRFLPVRPLFIDLKSSNILLGVDFRAKVSDFGLVKHAPDSEKSVATKLLGHLDTLPLNMQKLSILCIMQSLYSLYIPACSFLMGKITTKVVFSYGVSARGKPLLDQMHLKKLFERIGIVAELAGHCTAREAHHRPDMGHAVNVLAALVEKWKPVDDELDCYSGIDYTRPLPQMLKIWKEAESEEFSYAYSLANSRSSIAARSSGFADSFTSADAR 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02777 572 MobiDBLite consensus disorder prediction 173 187 - -
Gma13g02777 572 Gene3D Phosphorylase Kinase; domain 1 235 338 - -
Gma13g02777 572 ProSitePatterns Protein kinases ATP-binding region signature. 267 289 IPR017441 GO:0005524
Gma13g02777 572 PANTHER OSJNBA0070M12.3 PROTEIN 256 453 - -
Gma13g02777 572 PANTHER OSJNBA0070M12.3 PROTEIN 8 139 - -
Gma13g02777 572 PANTHER OSJNBA0070M12.3 PROTEIN 158 253 - -
Gma13g02777 572 PANTHER OSJNBA0070M12.3 PROTEIN 462 572 - -
Gma13g02777 572 SMART serkin_6 261 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02777 572 MobiDBLite consensus disorder prediction 155 172 - -
Gma13g02777 572 Gene3D Ribonuclease Inhibitor 3 87 IPR032675 -
Gma13g02777 572 SUPERFAMILY Protein kinase-like (PK-like) 250 501 IPR011009 -
Gma13g02777 572 SUPERFAMILY L domain-like 9 66 - -
Gma13g02777 572 Pfam Protein tyrosine and serine/threonine kinase 264 400 IPR001245 GO:0004672|GO:0006468
Gma13g02777 572 ProSiteProfiles Protein kinase domain profile. 261 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02777 572 PANTHER OSJNBA0070M12.3 PROTEIN 256 453 - -
Gma13g02777 572 PANTHER OSJNBA0070M12.3 PROTEIN 8 139 - -
Gma13g02777 572 PANTHER OSJNBA0070M12.3 PROTEIN 158 253 - -
Gma13g02777 572 PANTHER OSJNBA0070M12.3 PROTEIN 462 572 - -
Gma13g02777 572 MobiDBLite consensus disorder prediction 152 187 - -
Gma13g02777 572 Gene3D Transferase(Phosphotransferase) domain 1 363 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02777 Gma-Chr13 42350928 42353460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02777 131 511 Receptor kinase-like Gene Family AT4G02010 28.027 2.53e-28 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Gma13g02777 PK_Tyr_Ser-Thr 2.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02777 - - cam:101493565 521.546