Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02775 ATGCTCTTGTTCTTCCATTGGGTCGTAGAAAAGGAAAAAAAAGTGAGAAAATTCTCGCGTGGTTTTGAGATGGGGTTTCTGTTGAAAGAAGCTTTGAGGACTCTCTGCGGTCGGAATCAGTGGTCTTATGCTGTGTTCTGGAAGATCGGTTGCCACAATTCCAAGCTATTAATCTGGGAAGAATGCTATTATGAACCTTTGCCGTGGCCTCCACACATGTTTGGGATGCCTGATTTGCCTTACCAGAATGGGGAAGGATGCTGGTTTTCTTCAGAGTCTCTGTCATCTCAGCTTGGGATTCAAGAGGAGGTCCGAGTCTCTTCTTTGATTAAAAAAATGACTGTAAACAATTCAGTTATTATTGCAGGTGAAGGCATAATTGGACGGGCTGCATTTACAGGCAGCCATCAGTGGATTCTTTTGAACAATTTCACTGAAGATGCATATCCTCCACAGGTATATGCTGAAGTGCATCACCAATTTTCAGCTGGAATACAGACAGTAGCTGTTATTCCTGTGCTTCCTCATGGGGTTGTTCAACTTGGTTCTTTCTTGCCTATAATTGAGAATATGGGATTTGTGAATGATGTGAAGAGCTTGATCTTTCAATTGGGATGTGTTCCTGGCGCCCTTCTATCTGAAGACTATTCACCTCCCATTGCTGGTGTGCCTGTGTCTGTTGATCCACCAGTCATTGCCTCAAACTGCCCTCCATCCGTAACTAGTGGCTCCAATCAGCAAAATAATTCATCGCATGCTTCAATGTCCTTTAGTGTTCAAACACCATGTCCTCTAAAGGCAGAGACAAATACTTGCCAGGGTTCTGCATTGACACCCCAAACCCATAAGCTGAACCAGATATCCAATAACCCTTGCCAACCAAAGGTTATTCCAACGAGTAAAACAAACTTTGCTAGCCAACGAGAGAATAGAGCTGTGGAAGCTGAAGTAATACCCTCAGATCTAGATTCATGCCTGCAGCAGCATTCTGTTTCATGCAATGCAAGATCTGCTTTCAATAACTTGATTGGTTCTGGGTCTTTTGGTCAATCTGGTATAAGTGCTGATAATCTTACATTAATGGAGCAGCAAATCATATCAGCCATTGGGAATCGAGATAATGTTAATCCTTGTGTAAATGCCTCGAGTTCGTTGAACAAGTCTCAACTAAGAACAGATGGAGGCCATCTACTTGGCCACAATATGAGTTCTGGCAGTACTTCAATACTAGGAGGAATCCCAATACATGGTGGGATGAGTACTCTTTTGAGGTCAAATCTGATTACCAGTTCTGGTTCAAAATCTTCCCAAGCATCCACAGTTGATTTTTCTGGAGTAGGAGTTGGAATTGGACCTCAAAATTGTGATTCTTCAACTAAAGCTTTGGCAAATTTGACTAGTCAATCAGTAACCTTTCCCATACATGTAGAAGGTTCTAATCAGAAGATTCTTGTTTTAGATTTAAAGTGTGCTTCATCAAATCAAAAGATAGACTATGATTTGCTTCAGGCCCCTAACCCCCCCACTTTTCATGTTGAGGAACAAGTGCCCTTTAGTGGTCAAATCCCTGGTTTTACCCACGATTGCCTTCATAAAGATGGTAGTAGTCAATCTATGATGACAAAGGATCCTAAAGACAAACTAGATTGTGCTAAACCTCCATCAGGTGATGACCTGTTTGATGTTTTAGGGGTGGATTTGAAAAACCAATTGCTGAATGGAAACTGGGATAATCTCTTTACTTATGAATCAGATGCTAATGCAGAAAATATGGAAAAAAAGATAGCACCTATGAACAAGGAGGGTGTAACAATAAATCCTGATATTTATTCAGTTAAAGAAACAATATCAGACAGTGACATTTTTTCTGGGATGGGAACAGACAACCTCTTGGATGCCGTGGTCTCAAAAGCCAAATCTATTGTGAAACTGGATTCTGATGACATGTCTTGCAGGACAACATTGACAAGGAATAGTACTGCCTCTGTTCCTTCTCCTGCCTGCAGGCCGGTAATGTCGGGTCATTTCCAGGGGGGATTGTTTGATTTTCCTAAGAATTGGGGTAAAACAGGTGCCATAGAAACTAGTTTGCTTAGGTCCGGATGTAACAAGGATGATGCTGGAAACTGTTCTCAAACTAGTTCTGTTTATGGCTCTCAACTTAGTTCATGGGTTGAGAATAGTGGGAGTGTGAAACGTGAGAATATTGTTTCAACTGGATACTCAAAGCAGGCAGATGAGAGTTGCAAACCAAATCGTAAGAGGCTTAAACCAGGAGAGAATCCCCGGCCTCGACCGAAAGATCGTCAAATGATTCAAGATCGAGTGAAAGAGTTACGAGAAATTGTGCCAAACGGAGCAAAATGTAGCATAGATGCACTTTTGGAACGGACCATTAAGCACATGCTTTTCTTACAAAGCGTGACAAAGCATGCTGACAAGCTGAAACAAACAGGGGAGTCTAAGATTATTAATAAGGAAGGTGGGCTGCTTTTGAAAGACAACTTTGAGGGTGGGGCTACGTGGGCATATGAAGTTGGCTCACTATCAATGGTTTGCCCCATTGTAGTCGAGGATCTGATTCCACCTCGTCAGATGCTAGTGGAGatgctttgtgaggaacgaggttgctttttggaaatagccgacttaatcagaggattaggcttaaccatcttaaagggggtaatggaagctcacaatgacaaaatctgggcacgctttgctgttgagGCAAACAGGGATATAACAAGGATGGAAATATTTATGTCACTTGTTTGTCTTTTGGAGCAAACGGTGAAGGGCAACACATCTTCATCCAATGCAATTGATAACATGGTGTATCACTCTTTCCCACAGGCTACGCAGACAACAGAAAGGTCTAGTAGTTTGCAGTGA 2898 0.402 MLLFFHWVVEKEKKVRKFSRGFEMGFLLKEALRTLCGRNQWSYAVFWKIGCHNSKLLIWEECYYEPLPWPPHMFGMPDLPYQNGEGCWFSSESLSSQLGIQEEVRVSSLIKKMTVNNSVIIAGEGIIGRAAFTGSHQWILLNNFTEDAYPPQVYAEVHHQFSAGIQTVAVIPVLPHGVVQLGSFLPIIENMGFVNDVKSLIFQLGCVPGALLSEDYSPPIAGVPVSVDPPVIASNCPPSVTSGSNQQNNSSHASMSFSVQTPCPLKAETNTCQGSALTPQTHKLNQISNNPCQPKVIPTSKTNFASQRENRAVEAEVIPSDLDSCLQQHSVSCNARSAFNNLIGSGSFGQSGISADNLTLMEQQIISAIGNRDNVNPCVNASSSLNKSQLRTDGGHLLGHNMSSGSTSILGGIPIHGGMSTLLRSNLITSSGSKSSQASTVDFSGVGVGIGPQNCDSSTKALANLTSQSVTFPIHVEGSNQKILVLDLKCASSNQKIDYDLLQAPNPPTFHVEEQVPFSGQIPGFTHDCLHKDGSSQSMMTKDPKDKLDCAKPPSGDDLFDVLGVDLKNQLLNGNWDNLFTYESDANAENMEKKIAPMNKEGVTINPDIYSVKETISDSDIFSGMGTDNLLDAVVSKAKSIVKLDSDDMSCRTTLTRNSTASVPSPACRPVMSGHFQGGLFDFPKNWGKTGAIETSLLRSGCNKDDAGNCSQTSSVYGSQLSSWVENSGSVKRENIVSTGYSKQADESCKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIINKEGGLLLKDNFEGGATWAYEVGSLSMVCPIVVEDLIPPRQMLVEMLCEERGCFLEIADLIRGLGLTILKGVMEAHNDKIWARFAVEANRDITRMEIFMSLVCLLEQTVKGNTSSSNAIDNMVYHSFPQATQTTERSSSLQ 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02775 965 MobiDBLite consensus disorder prediction 747 770 - -
Gma13g02775 965 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 28 200 IPR025610 -
Gma13g02775 965 CDD bHLH_AtLHW_like 760 829 - -
Gma13g02775 965 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 24 965 IPR043561 GO:0003700|GO:0006355
Gma13g02775 965 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 756 805 IPR011598 GO:0046983
Gma13g02775 965 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 24 965 - -
Gma13g02775 965 MobiDBLite consensus disorder prediction 740 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02775 Gma-Chr13 42338522 42345630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02775 544 946 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 51.220 1.40e-111 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02775 - - gmx:100791138 1918.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02775 13 42338522 42345630 Gma13g02775 13 42338522 42345630 ECH
Gma13g02775 13 42338522 42345630 Gma12g01783 12 38407007 38413891 GST
Gma13g02775 13 42338522 42345630 Gma12g00842 12 7927738 7935707 PCT
Gma13g02775 13 42338522 42345630 Gma11g01456 11 15239252 15245419 PCT
Gma12g00842 12 7927738 7935707 Gma13g02775 13 42338522 42345630 PCT
Gma11g01456 11 15239252 15245419 Gma13g02775 13 42338522 42345630 PCT